RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 DOCK5Q9H7D0 1870 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 MAP1BP46821 2468 aaKnown RBP6.7□□□□□ -1.34
CDH13-212ENST00000569144 CHD8Q9HCK8 2581 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 PNMA6FA0A0J9YX94 578 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 SPDYE3A6NKU9 549 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 B4E1Z4 1266 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 NT5C1B-RDH14C9J2C7 533 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 EREGO14944 169 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 MAFGO15525 162 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 LRRN2O75325 713 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 ZSCAN20P17040 1043 aaPredicted RBP6.69□□□□□ -1.34
CDH13-212ENST00000569144 ITGB5P18084 799 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 KLRC1P26715 233 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 PMLP29590 882 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 MAGEA9P43362 315 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 SLC26A2P50443 739 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 CLCN4P51793 760 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 ATP11AP98196 1134 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 CSTF1Q05048 431 aaKnown RBP6.69□□□□□ -1.34
CDH13-212ENST00000569144 MTMR1Q13613 665 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 ECHDC2Q86YB7 292 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 SMARCC2Q8TAQ2 1214 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 OTUD7AQ8TE49 926 aaPredicted RBP6.69□□□□□ -1.34
CDH13-212ENST00000569144 RSPH1Q8WYR4 309 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 TTC9Q92623 222 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 NELL1Q92832 810 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 CUL5Q93034 780 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 PMEPA1Q969W9 287 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 IGSF21Q96ID5 467 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 OSMRQ99650 979 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 UBAC1Q9BSL1 405 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 EMILIN2Q9BXX0 1053 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 SPATA6Q9NWH7 488 aaPredicted RBP6.69□□□□□ -1.34
CDH13-212ENST00000569144 ZSWIM5Q9P217 1185 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 SLC9A2Q9UBY0 812 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 UBIAD1Q9Y5Z9 338 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 CLUHO75153 1309 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 KAT6AQ92794 2004 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 COL1A2P08123 1366 aa6.69□□□□□ -1.34
CDH13-212ENST00000569144 MYH6P13533 1939 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 KANSL1LA0AUZ9 987 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 ANHXE9PGG2 379 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 FAM229AH3BQW9 127 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 MEIS2O14770 477 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 CYTH3O43739 400 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 HBP1O60381 514 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 LRP3O75074 770 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 ZC3H11AO75152 810 aaKnown RBP eCLIP6.68□□□□□ -1.34
CDH13-212ENST00000569144 GPR32O75388 356 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 KLRC2P26717 231 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 STAT5BP51692 787 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 MFAP1P55081 439 aaKnown RBP6.68□□□□□ -1.34
CDH13-212ENST00000569144 SHC2P98077 582 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 GRM4Q14833 912 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 WTAPQ15007 396 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 SEC23AQ15436 765 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 KIZQ2M2Z5 673 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 USP17L6PQ6QN14 398 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 TMEM173Q86WV6 379 aaPredicted RBP6.68□□□□□ -1.34
CDH13-212ENST00000569144 DMRTC2Q8IXT2 367 aaPredicted RBP6.68□□□□□ -1.34
CDH13-212ENST00000569144 RNF169Q8NCN4 708 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 DDX1Q92499 740 aaKnown RBP6.68□□□□□ -1.34
CDH13-212ENST00000569144 KLHL5Q96PQ7 755 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 CITED4Q96RK1 184 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 MYADMQ96S97 322 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 FAM129BQ96TA1 746 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 DDX23Q9BUQ8 820 aaKnown RBP6.68□□□□□ -1.34
CDH13-212ENST00000569144 OSBPL6Q9BZF3 934 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 RASSF4Q9H2L5 321 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 JADE2Q9NQC1 790 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 STK39Q9UEW8 545 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 DPP7Q9UHL4 492 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 SALL4Q9UJQ4 1053 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.68□□□□□ -1.34
CDH13-212ENST00000569144 GPR179Q6PRD1 2367 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 SALL3Q9BXA9 1300 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 ATRXP46100 2492 aa6.68□□□□□ -1.34
CDH13-212ENST00000569144 A0A0U1RQF3 1178 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 CCDC195A0A1B0GUA6 201 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.67□□□□□ -1.34
CDH13-212ENST00000569144 PAPLNO95428 1278 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 PROS1P07225 676 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 CNPP09543 421 aaKnown RBP6.67□□□□□ -1.34
CDH13-212ENST00000569144 LAMP2P13473 410 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 ACPPP15309 386 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 MAPK1P28482 360 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 ACTR2P61160 394 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 PRKCQQ04759 706 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 NMIQ13287 307 aaPredicted RBP6.67□□□□□ -1.34
CDH13-212ENST00000569144 HTR4Q13639 388 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 PRRT3Q5FWE3 981 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 ZNF484Q5JVG2 852 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 CEP135Q66GS9 1140 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 RSPO2Q6UXX9 243 aaPredicted RBP6.67□□□□□ -1.34
CDH13-212ENST00000569144 KCTD17Q8N5Z5 321 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 CEP120Q8N960 986 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 BCL7CQ8WUZ0 217 aaPredicted RBP6.67□□□□□ -1.34
CDH13-212ENST00000569144 PPP1R16BQ96T49 567 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 VN1R3Q9BXE9 311 aa6.67□□□□□ -1.34
CDH13-212ENST00000569144 FAM126AQ9BYI3 521 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms