RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 CDT1Q9H211 546 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 PLEKHA4Q9H4M7 779 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 TOPORSQ9NS56 1045 aaPredicted RBP14.12□□□□□ -0.15
TSC2-220ENST00000568238 LIMD1Q9UGP4 676 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 RCOR1Q9UKL0 485 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 CACNA1HO95180 2353 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 TMEM189-UBE2V1I3L0A0 370 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 SLC16A4O15374 487 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 CUTAO60888 179 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 PLA2G4BP0C869 781 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 SPATA31D3P0C874 917 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 HOXD11P31277 338 aaPredicted RBP14.11□□□□□ -0.15
TSC2-220ENST00000568238 SLC12A3P55017 1021 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 KARSQ15046 597 aaKnown RBP14.11□□□□□ -0.15
TSC2-220ENST00000568238 PSMD5Q16401 504 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 TMEM119Q4V9L6 283 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 PDXDC1Q6P996 788 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 PRSS55Q6UWB4 352 aaPredicted RBP14.11□□□□□ -0.15
TSC2-220ENST00000568238 SPATA31D4Q6ZUB0 917 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 CEP120Q8N960 986 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 SYT2Q8N9I0 419 aaPredicted RBP14.11□□□□□ -0.15
TSC2-220ENST00000568238 PIK3R5Q8WYR1 880 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 SMG7Q92540 1137 aaKnown RBP14.11□□□□□ -0.15
TSC2-220ENST00000568238 STAMQ92783 540 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 TARS2Q9BW92 718 aaKnown RBP14.11□□□□□ -0.15
TSC2-220ENST00000568238 SCAND2PQ9GZW5 306 aaPredicted RBP14.11□□□□□ -0.15
TSC2-220ENST00000568238 ZDHHC7Q9NXF8 308 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 KCND2Q9NZV8 630 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 PCDHA7Q9UN72 937 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 MYH15Q9Y2K3 1946 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 CLUHO75153 1309 aa14.11□□□□□ -0.15
TSC2-220ENST00000568238 SLC26A4O43511 780 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 B3GAT3O94766 335 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 PAPLNO95428 1278 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 MCF2P10911 925 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 HARSP12081 509 aaKnown RBP14.1□□□□□ -0.15
TSC2-220ENST00000568238 PLS3P13797 630 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 PROZP22891 400 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 TXLNAP40222 546 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 CLCNKBP51801 687 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 SMTNP53814 917 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 NHLH1Q02575 133 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 STRN3Q13033 797 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 AXDND1Q5T1B0 1012 aaPredicted RBP14.1□□□□□ -0.15
TSC2-220ENST00000568238 MPZL3Q6UWV2 235 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.1□□□□□ -0.15
TSC2-220ENST00000568238 CEP57Q86XR8 500 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 LNX1Q8TBB1 728 aaPredicted RBP14.1□□□□□ -0.15
TSC2-220ENST00000568238 SPIRE2Q8WWL2 714 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 ZNF707Q96C28 371 aaPredicted RBP14.1□□□□□ -0.15
TSC2-220ENST00000568238 CALML4Q96GE6 196 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 SNX27Q96L92 541 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 UROC1Q96N76 676 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 TCHPQ9BT92 498 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 SMOC2Q9H3U7 446 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 PIDD1Q9HB75 910 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 PTPRHQ9HD43 1115 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 WDR6Q9NNW5 1121 aaKnown RBP14.1□□□□□ -0.15
TSC2-220ENST00000568238 ANKFY1Q9P2R3 1169 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 KCNG1Q9UIX4 513 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 DOCK6Q96HP0 2047 aa14.1□□□□□ -0.15
TSC2-220ENST00000568238 SMIM28A0A1B0GU29 152 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 SFI1A8K8P3 1242 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 MAPTP10636 758 aaKnown RBP14.09□□□□□ -0.15
TSC2-220ENST00000568238 PLCG1P19174 1290 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 VCPP55072 806 aaKnown RBP14.09□□□□□ -0.15
TSC2-220ENST00000568238 OSTNP61366 133 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 NOLC1Q14978 699 aaKnown RBP eCLIP14.09□□□□□ -0.15
TSC2-220ENST00000568238 UPP1Q16831 310 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 LIN9Q5TKA1 542 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 LILRA6Q6PI73 481 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 SHC4Q6S5L8 630 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 TMEM161BQ8NDZ6 487 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 PRRX2Q99811 253 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 CLSTN3Q9BQT9 956 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 NTPCRQ9BSD7 190 aaKnown RBP14.09□□□□□ -0.15
TSC2-220ENST00000568238 GOLGA2P5Q9HBQ8 144 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 SLC38A7Q9NVC3 462 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 FBXW11Q9UKB1 542 aa14.09□□□□□ -0.15
TSC2-220ENST00000568238 H0YCG3 227 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 ABLIM1O14639 778 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 TRAPPC3O43617 180 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 N4BP1O75113 896 aaKnown RBP14.08□□□□□ -0.16
TSC2-220ENST00000568238 TOM1L1O75674 476 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 ZMYND10O75800 440 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 PDGFBP01127 241 aaPredicted RBP14.08□□□□□ -0.16
TSC2-220ENST00000568238 GBP2P32456 591 aaPredicted RBP14.08□□□□□ -0.16
TSC2-220ENST00000568238 CACNB1Q02641 598 aaPredicted RBP14.08□□□□□ -0.16
TSC2-220ENST00000568238 XKR4Q5GH76 650 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 IER5LQ5T953 404 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 DCLRE1AQ6PJP8 1040 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 ALKAL1Q6UXT8 129 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 PRSS33Q8NF86 280 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 ACAP3Q96P50 834 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 PANK2Q9BZ23 570 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 PRKD2Q9BZL6 878 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 CCSER1Q9C0I3 900 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 CNTN3Q9P232 1028 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 LARSQ9P2J5 1176 aaKnown RBP14.08□□□□□ -0.16
TSC2-220ENST00000568238 MTRRQ9UBK8 725 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms