RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 BFSP1Q12934 665 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 TMEM132DQ14C87 1099 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 IQCB1Q15051 598 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 FRMD5Q7Z6J6 570 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 USP37Q86T82 979 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 NT5DC4Q86YG4 428 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 IRF2BP1Q8IU81 584 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 FAM114A1Q8IWE2 563 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 DHX40Q8IX18 779 aaKnown RBP17.03■□□□□ 0.32
SPG7-218ENST00000568205 EFCAB13Q8IY85 973 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 FAM200AQ8TCP9 573 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 SP7Q8TDD2 431 aaPredicted RBP17.03■□□□□ 0.32
SPG7-218ENST00000568205 PARD3BQ8TEW8 1205 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 CNOT6LQ96LI5 555 aaKnown RBP17.03■□□□□ 0.32
SPG7-218ENST00000568205 CGRRF1Q99675 332 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 SAMSN1Q9NSI8 373 aaKnown RBP17.03■□□□□ 0.32
SPG7-218ENST00000568205 SLC38A7Q9NVC3 462 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 PCDHA11Q9Y5I1 949 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 COL4A6Q14031 1691 aa17.03■□□□□ 0.32
SPG7-218ENST00000568205 LRRIQ3A6PVS8 624 aaPredicted RBP17.02■□□□□ 0.32
SPG7-218ENST00000568205 SMTNL1A8MU46 457 aa17.02■□□□□ 0.32
SPG7-218ENST00000568205 VAMP7P51809 220 aa17.02■□□□□ 0.32
SPG7-218ENST00000568205 MARSP56192 900 aaKnown RBP17.02■□□□□ 0.32
SPG7-218ENST00000568205 MCCD1P59942 119 aaPredicted RBP17.02■□□□□ 0.32
SPG7-218ENST00000568205 TFAMQ00059 246 aaKnown RBP17.02■□□□□ 0.32
SPG7-218ENST00000568205 NAB2Q15742 525 aa17.02■□□□□ 0.32
SPG7-218ENST00000568205 ZBTB6Q15916 424 aa17.02■□□□□ 0.32
SPG7-218ENST00000568205 LMBRD2Q68DH5 695 aaPredicted RBP17.02■□□□□ 0.32
SPG7-218ENST00000568205 ZNF280BQ86YH2 543 aa17.02■□□□□ 0.32
SPG7-218ENST00000568205 WDR49Q8IV35 697 aa17.02■□□□□ 0.32
SPG7-218ENST00000568205 C18orf25Q96B23 403 aaPredicted RBP17.02■□□□□ 0.32
SPG7-218ENST00000568205 FAM84AQ96KN4 292 aa17.02■□□□□ 0.32
SPG7-218ENST00000568205 INTS13Q9NVM9 706 aa17.02■□□□□ 0.32
SPG7-218ENST00000568205 FANCLQ9NW38 375 aa17.02■□□□□ 0.32
SPG7-218ENST00000568205 UBQLN1Q9UMX0 589 aaKnown RBP17.02■□□□□ 0.32
SPG7-218ENST00000568205 COLQQ9Y215 455 aaPredicted RBP17.02■□□□□ 0.32
SPG7-218ENST00000568205 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.02■□□□□ 0.32
SPG7-218ENST00000568205 MRPL42Q9Y6G3 142 aaKnown RBP17.02■□□□□ 0.32
SPG7-218ENST00000568205 PTPRJQ12913 1337 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 LCHNA4D1U4 455 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 BECN2A8MW95 431 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 XPOTO43592 962 aaKnown RBP17.01■□□□□ 0.31
SPG7-218ENST00000568205 B4GALT3O60512 393 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 DDHD2O94830 711 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 TRIM49P0CI25 452 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 TRIM49CP0CI26 452 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 TNNI1P19237 187 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 CYP3A5P20815 502 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 DLG4P78352 724 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 CLDN10P78369 228 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 DSC1Q08554 894 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 TUSC3Q13454 348 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 RAB30Q15771 203 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 HSP90AA4PQ58FG1 418 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 C1orf220Q5T0J3 134 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 CDKAL1Q5VV42 579 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 TRIM59Q8IWR1 403 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 FIBCD1Q8N539 461 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 BEST2Q8NFU1 509 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 FAM193BQ96PV7 902 aaPredicted RBP17.01■□□□□ 0.31
SPG7-218ENST00000568205 POP1Q99575 1024 aaKnown RBP17.01■□□□□ 0.31
SPG7-218ENST00000568205 NRDE2Q9H7Z3 1164 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 MAGEC2Q9UBF1 373 aaPredicted RBP17.01■□□□□ 0.31
SPG7-218ENST00000568205 HCSTQ9UBK5 93 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 TUBGCP4Q9UGJ1 667 aa17.01■□□□□ 0.31
SPG7-218ENST00000568205 TMEM191BP0C7N4 346 aa17■□□□□ 0.31
SPG7-218ENST00000568205 MYOGP15173 224 aa17■□□□□ 0.31
SPG7-218ENST00000568205 EEF1GP26641 437 aaKnown RBP17■□□□□ 0.31
SPG7-218ENST00000568205 SOX4Q06945 474 aaPredicted RBP17■□□□□ 0.31
SPG7-218ENST00000568205 DUOXA2Q1HG44 320 aa17■□□□□ 0.31
SPG7-218ENST00000568205 DCAF17Q5H9S7 520 aaPredicted RBP17■□□□□ 0.31
SPG7-218ENST00000568205 LUZP1Q86V48 1076 aa17■□□□□ 0.31
SPG7-218ENST00000568205 COLGALT2Q8IYK4 626 aa17■□□□□ 0.31
SPG7-218ENST00000568205 OR5B17Q8NGF7 314 aa17■□□□□ 0.31
SPG7-218ENST00000568205 CACTINQ8WUQ7 758 aaKnown RBP17■□□□□ 0.31
SPG7-218ENST00000568205 SLC35C1Q96A29 364 aa17■□□□□ 0.31
SPG7-218ENST00000568205 ANKRD36BP1Q96IX9 119 aa17■□□□□ 0.31
SPG7-218ENST00000568205 PBX4Q9BYU1 374 aa17■□□□□ 0.31
SPG7-218ENST00000568205 MTMR12Q9C0I1 747 aa17■□□□□ 0.31
SPG7-218ENST00000568205 HSD3B7Q9H2F3 369 aa17■□□□□ 0.31
SPG7-218ENST00000568205 CWH43Q9H720 699 aa17■□□□□ 0.31
SPG7-218ENST00000568205 YBX2Q9Y2T7 364 aaKnown RBP17■□□□□ 0.31
SPG7-218ENST00000568205 PTPRSQ13332 1948 aa17■□□□□ 0.31
SPG7-218ENST00000568205 RANBP2P49792 3224 aaKnown RBP16.99■□□□□ 0.31
SPG7-218ENST00000568205 CASTOR2A6NHX0 329 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 KCNJ18B7U540 433 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 ZC3H11AO75152 810 aaKnown RBP eCLIP16.99■□□□□ 0.31
SPG7-218ENST00000568205 TNNC2P02585 160 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 CA3P07451 260 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 ZNF18P17022 549 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 PBX2P40425 430 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 MTIF2P46199 727 aaKnown RBP16.99■□□□□ 0.31
SPG7-218ENST00000568205 GUCY2FP51841 1108 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 AP3M2P53677 418 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 KCNJ12Q14500 433 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 TCERG1LQ5VWI1 586 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 CREBRFQ8IUR6 639 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 ZNF516Q92618 1163 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 UROC1Q96N76 676 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 TMEM175Q9BSA9 504 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms