RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 SMTNP53814 917 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 CEBPZQ03701 1054 aaKnown RBP13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 UPP1Q16831 310 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 ALKAL1Q6UXT8 129 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 GRASPQ7Z6J2 395 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 UBALD2Q8IYN6 164 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 SPIRE2Q8WWL2 714 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 BICD1Q96G01 975 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 CALML4Q96GE6 196 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 SNX27Q96L92 541 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 REEP2Q9BRK0 252 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 PRKD2Q9BZL6 878 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 HAPLN2Q9GZV7 340 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 C17orf75Q9HAS0 396 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 TOPORSQ9NS56 1045 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 CLIC4Q9Y696 253 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 CDY1Q9Y6F8 540 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 C2orf16Q68DN1 1984 aa13.38□□□□□ -0.27
GTF3C1-208ENST00000567843 PODXLO00592 558 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 FAM13AO94988 1023 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 KRT18P05783 430 aaKnown RBP13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 C8AP07357 584 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 FGFR3P22607 806 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 MARCKSP29966 332 aaPredicted RBP13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 ARPP19P56211 112 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 CREMQ03060 361 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 ELAVL2Q12926 359 aaKnown RBP13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 TDGQ13569 410 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 CUL4AQ13619 759 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 PPM1LQ5SGD2 360 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 LIN9Q5TKA1 542 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 USP49Q70CQ1 688 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 HAUS6Q7Z4H7 955 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 BRAPQ7Z569 592 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 GPR65Q8IYL9 337 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 MYCT1Q8N699 235 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 FLCNQ8NFG4 579 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 SLC7A14Q8TBB6 771 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 HDAC7Q8WUI4 952 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 STAMQ92783 540 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 DDX27Q96GQ7 796 aaKnown RBP13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 NTPCRQ9BSD7 190 aaKnown RBP13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 TIPINQ9BVW5 301 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 MFSD1Q9H3U5 465 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 BLOC1S4Q9NUP1 217 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 FBXW11Q9UKB1 542 aa13.37□□□□□ -0.27
GTF3C1-208ENST00000567843 TRIP11Q15643 1979 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 DOCK6Q96HP0 2047 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 TMEM189-UBE2V1I3L0A0 370 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 K7ENM7 598 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 TOM1L1O75674 476 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 CFHP08603 1231 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 CXCL8P10145 99 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 TNFSF9P41273 254 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 TCF15Q12870 199 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 NOLC1Q14978 699 aaKnown RBP eCLIP13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 SLC10A6Q3KNW5 377 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 XKR4Q5GH76 650 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 ZBTB41Q5SVQ8 909 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 AXDND1Q5T1B0 1012 aaPredicted RBP13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 TMEM105Q8N8V8 129 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 EPSTI1Q96J88 318 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 AK8Q96MA6 479 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 UROC1Q96N76 676 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 CLIC6Q96NY7 704 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 ZDHHC7Q9NXF8 308 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 LARSQ9P2J5 1176 aaKnown RBP13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 MTRRQ9UBK8 725 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 TUBGCP4Q9UGJ1 667 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 FBXL21Q9UKT6 434 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 NUB1Q9Y5A7 615 aa13.36□□□□□ -0.27
GTF3C1-208ENST00000567843 H0Y858 1186 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 TULP1O00294 542 aaPredicted RBP13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 CLDN3O15551 220 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 TRAPPC3O43617 180 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 SYT1P21579 422 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 FSHRP23945 695 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 NMT1P30419 496 aaKnown RBP13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 LONP1P36776 959 aaKnown RBP13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 MRE11P49959 708 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 GUCY2FP51841 1108 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 NCKAP1LP55160 1127 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 RAB33AQ14088 237 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 RAD54LQ92698 747 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 FAM212AQ96EL1 285 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 RPP25Q9BUL9 199 aaKnown RBP13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 KCNH6Q9H252 994 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 SLC38A7Q9NVC3 462 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 HCFC1R1Q9NWW0 138 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 CNTN3Q9P232 1028 aa13.35□□□□□ -0.27
GTF3C1-208ENST00000567843 ZFHX2Q9C0A1 2572 aaPredicted RBP13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 DENND4AQ7Z401 1863 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 HNRNPDLO14979 420 aaKnown RBP13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 LAMP2P13473 410 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 KCNE1P15382 129 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 LIG4P49917 911 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 PTPN5P54829 565 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms