RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 PSMC3P17980 439 aa18.64■□□□□ 0.57
CDH3-205ENST00000566808 FGD1P98174 961 aa18.64■□□□□ 0.57
CDH3-205ENST00000566808 PTGDRQ13258 359 aa18.64■□□□□ 0.57
CDH3-205ENST00000566808 PRSS36Q5K4E3 855 aa18.64■□□□□ 0.57
CDH3-205ENST00000566808 POTEHQ6S545 545 aa18.64■□□□□ 0.57
CDH3-205ENST00000566808 DEPDC1BQ8WUY9 529 aa18.64■□□□□ 0.57
CDH3-205ENST00000566808 ASB16Q96NS5 453 aa18.64■□□□□ 0.57
CDH3-205ENST00000566808 ZMIZ1Q9ULJ6 1067 aa18.64■□□□□ 0.57
CDH3-205ENST00000566808 CDY1Q9Y6F8 540 aa18.64■□□□□ 0.57
CDH3-205ENST00000566808 A0A1B0GUA9 196 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 ARHGEF37A1IGU5 675 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 PTGESO14684 152 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 B4GALT5O43286 388 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 MICAL2O94851 1124 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 LRG1P02750 347 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 PTPN2P17706 415 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 FGFR3P22607 806 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 GDI1P31150 447 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 MLLT6P55198 1093 aaPredicted RBP18.63■□□□□ 0.57
CDH3-205ENST00000566808 NLRP5P59047 1200 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 SPIRE1Q08AE8 756 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 CAPSQ13938 189 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 KRT32Q14532 448 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 SF3A2Q15428 464 aaKnown RBP18.63■□□□□ 0.57
CDH3-205ENST00000566808 XKR9Q5GH70 373 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 VITQ6UXI7 678 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 LOXL4Q96JB6 756 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 XPNPEP1Q9NQW7 623 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 DMXL2Q8TDJ6 3036 aa18.63■□□□□ 0.57
CDH3-205ENST00000566808 ZNF197O14709 1029 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 THP07101 528 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 HMGB1P09429 215 aaKnown RBP18.62■□□□□ 0.57
CDH3-205ENST00000566808 ZNF806P0C7X5 589 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 HOXA6P31267 233 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 ADCK5Q3MIX3 580 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 TSGA10IPQ3SY00 556 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 STPG1Q5TH74 334 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 HEATR6Q6AI08 1181 aaKnown RBP18.62■□□□□ 0.57
CDH3-205ENST00000566808 CDR2LQ86X02 465 aaPredicted RBP18.62■□□□□ 0.57
CDH3-205ENST00000566808 SMARCD2Q92925 531 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 FAM20AQ96MK3 541 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 SLC26A6Q9BXS9 759 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 SLKQ9H2G2 1235 aaPredicted RBP18.62■□□□□ 0.57
CDH3-205ENST00000566808 PCDHA4Q9UN74 947 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 BACE2Q9Y5Z0 518 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 TRIP11Q15643 1979 aa18.62■□□□□ 0.57
CDH3-205ENST00000566808 WDR27A2RRH5 827 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 C1QTNF9BB2RNN3 333 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 TMEM189-UBE2V1I3L0A0 370 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 SLC37A4O43826 429 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 KCNK5O95279 499 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 C1QTNF9P0C862 333 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 CCNE1P24864 410 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 NAB2Q15742 525 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 NTRK3Q16288 839 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 ANKS3Q6ZW76 656 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 WDR5BQ86VZ2 330 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 KDF1Q8NAX2 398 aaPredicted RBP18.61■□□□□ 0.57
CDH3-205ENST00000566808 ASAP3Q8TDY4 903 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 CORO1BQ9BR76 489 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 LSM14BQ9BX40 385 aaKnown RBP18.61■□□□□ 0.57
CDH3-205ENST00000566808 KCNMB3Q9NPA1 279 aa18.61■□□□□ 0.57
CDH3-205ENST00000566808 TMEM8BA6NDV4 472 aa18.6■□□□□ 0.57
CDH3-205ENST00000566808 ARNTLO00327 626 aa18.6■□□□□ 0.57
CDH3-205ENST00000566808 ZNF263O14978 683 aa18.6■□□□□ 0.57
CDH3-205ENST00000566808 EPN2O95208 641 aa18.6■□□□□ 0.57
CDH3-205ENST00000566808 IFNAR1P17181 557 aa18.6■□□□□ 0.57
CDH3-205ENST00000566808 EPHA7Q15375 998 aa18.6■□□□□ 0.57
CDH3-205ENST00000566808 PDZD4Q76G19 769 aaPredicted RBP18.6■□□□□ 0.57
CDH3-205ENST00000566808 TCEAL4Q96EI5 215 aa18.6■□□□□ 0.57
CDH3-205ENST00000566808 DDX27Q96GQ7 796 aaKnown RBP18.6■□□□□ 0.57
CDH3-205ENST00000566808 PRIMPOLQ96LW4 560 aa18.6■□□□□ 0.57
CDH3-205ENST00000566808 ARRDC1-AS1Q9H2J1 176 aa18.6■□□□□ 0.57
CDH3-205ENST00000566808 ZSWIM4Q9H7M6 989 aa18.6■□□□□ 0.57
CDH3-205ENST00000566808 RXFP3Q9NSD7 469 aa18.6■□□□□ 0.57
CDH3-205ENST00000566808 EML5Q05BV3 1969 aa18.6■□□□□ 0.57
CDH3-205ENST00000566808 M0R2N6 131 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 PRRG1O14668 218 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 RECQL4O94761 1208 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 ELF1P32519 619 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 RBM25P49756 843 aaKnown RBP18.59■□□□□ 0.57
CDH3-205ENST00000566808 ROR1Q01973 937 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 DGKKQ5KSL6 1271 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 PSAPL1Q6NUJ1 521 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 PPP4R3CPQ6ZMV5 832 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 Q6ZS52 159 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 RASEFQ8IZ41 740 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 BLIDQ8IZY5 108 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 DAGLBQ8NCG7 672 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 ZNF461Q8TAF7 563 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 BRF1Q92994 677 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 TRPV4Q9HBA0 871 aa18.59■□□□□ 0.57
CDH3-205ENST00000566808 NUP210Q8TEM1 1887 aaPredicted RBP18.58■□□□□ 0.57
CDH3-205ENST00000566808 NRG2O14511 850 aaPredicted RBP18.58■□□□□ 0.56
CDH3-205ENST00000566808 AXIN1O15169 862 aa18.58■□□□□ 0.56
CDH3-205ENST00000566808 DGAT1O75907 488 aa18.58■□□□□ 0.56
CDH3-205ENST00000566808 GLRA2P23416 452 aa18.58■□□□□ 0.56
CDH3-205ENST00000566808 ARL2P36404 184 aa18.58■□□□□ 0.56
CDH3-205ENST00000566808 CCR2P41597 374 aa18.58■□□□□ 0.56
CDH3-205ENST00000566808 CCDC6Q16204 474 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms