RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 KREMEN1Q96MU8 473 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 MXRA8Q9BRK3 442 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 DCLK3Q9C098 648 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 TMX4Q9H1E5 349 aaPredicted RBP23.03■■□□□ 1.28
SPSB3-208ENST00000566339 WRAP73Q9P2S5 460 aaPredicted RBP23.03■■□□□ 1.28
SPSB3-208ENST00000566339 PTPN22Q9Y2R2 807 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 IGF2BP3O00425 579 aaKnown RBP eCLIP23.02■■□□□ 1.28
SPSB3-208ENST00000566339 THAP12O43422 761 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 KCNJ1P48048 391 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 NCKAP1LP55160 1127 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 TGFB2P61812 414 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 ATP11AP98196 1134 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 IL9RQ01113 521 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 CCNG2Q16589 344 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 CLEC16AQ2KHT3 1053 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 SHROOM1Q2M3G4 852 aaPredicted RBP23.02■■□□□ 1.28
SPSB3-208ENST00000566339 FAM160B2Q86V87 743 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 TDRPQ86YL5 185 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 RDH13Q8NBN7 331 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 BANK1Q8NDB2 785 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 AGAP11Q8TF27 550 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 NT5C1BQ96P26 610 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 SENP1Q9P0U3 644 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 ANAPC5Q9UJX4 755 aa23.02■■□□□ 1.28
SPSB3-208ENST00000566339 IPO5O00410 1097 aaKnown RBP23.01■■□□□ 1.27
SPSB3-208ENST00000566339 CYP26A1O43174 497 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 CFBP00751 764 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 CHRM1P11229 460 aaPredicted RBP23.01■■□□□ 1.27
SPSB3-208ENST00000566339 MSH2P43246 934 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 PPARDQ03181 441 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 RASA2Q15283 850 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 DACT2Q5SW24 774 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 UHMK1Q8TAS1 419 aaKnown RBP23.01■■□□□ 1.27
SPSB3-208ENST00000566339 HELQQ8TDG4 1101 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 NSMCE1Q8WV22 266 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 DDX1Q92499 740 aaKnown RBP23.01■■□□□ 1.27
SPSB3-208ENST00000566339 FAM212AQ96EL1 285 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 STAMBPL1Q96FJ0 436 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 MASTLQ96GX5 879 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 DDX23Q9BUQ8 820 aaKnown RBP23.01■■□□□ 1.27
SPSB3-208ENST00000566339 EURLQ9NYK6 297 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 NINJ2Q9NZG7 142 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 HERC5Q9UII4 1024 aaKnown RBP23.01■■□□□ 1.27
SPSB3-208ENST00000566339 STARD13Q9Y3M8 1113 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 NEU2Q9Y3R4 380 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 ZBTB39O15060 712 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 CLDN3O15551 220 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 ITGA8P53708 1063 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 ZNF746Q6NUN9 644 aaPredicted RBP23.01■■□□□ 1.27
SPSB3-208ENST00000566339 MIER3Q7Z3K6 550 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 SH3TC2Q8TF17 1288 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 TTC25Q96NG3 672 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 TMEM237Q96Q45 408 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 TGS1Q96RS0 853 aaKnown RBP23.01■■□□□ 1.27
SPSB3-208ENST00000566339 KCNK9Q9NPC2 374 aa23.01■■□□□ 1.27
SPSB3-208ENST00000566339 PSTPIP1O43586 416 aa23■■□□□ 1.27
SPSB3-208ENST00000566339 LUC7L3O95232 432 aaKnown RBP23■■□□□ 1.27
SPSB3-208ENST00000566339 ACSL3O95573 720 aa23■■□□□ 1.27
SPSB3-208ENST00000566339 DPEP1P16444 411 aa23■■□□□ 1.27
SPSB3-208ENST00000566339 MAPK4P31152 587 aa23■■□□□ 1.27
SPSB3-208ENST00000566339 KCNJ2P63252 427 aa23■■□□□ 1.27
SPSB3-208ENST00000566339 GCNT1Q02742 428 aa23■■□□□ 1.27
SPSB3-208ENST00000566339 AOC3Q16853 763 aa23■■□□□ 1.27
SPSB3-208ENST00000566339 UBAP2Q5T6F2 1119 aaKnown RBP23■■□□□ 1.27
SPSB3-208ENST00000566339 HAUS6Q7Z4H7 955 aa23■■□□□ 1.27
SPSB3-208ENST00000566339 TBC1D31Q96DN5 1066 aa23■■□□□ 1.27
SPSB3-208ENST00000566339 CBWD1Q9BRT8 395 aa23■■□□□ 1.27
SPSB3-208ENST00000566339 TMX2Q9Y320 296 aa23■■□□□ 1.27
SPSB3-208ENST00000566339 UNC5CO95185 931 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 DLATP10515 647 aaKnown RBP22.99■■□□□ 1.27
SPSB3-208ENST00000566339 BPIFB4P59827 614 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 MYO1EQ12965 1108 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 MKRN4PQ13434 485 aaPredicted RBP22.99■■□□□ 1.27
SPSB3-208ENST00000566339 CCDC38Q502W7 563 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 CMPK2Q5EBM0 449 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 SLC47A2Q86VL8 602 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 AGGF1Q8N302 714 aaeCLIP22.99■■□□□ 1.27
SPSB3-208ENST00000566339 PPM1KQ8N3J5 372 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 SAMD3Q8N6K7 520 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 INPP5DQ92835 1189 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 FAM196BA6NMK8 535 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 GH2P01242 217 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 ARP10275 920 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 CHKAP35790 457 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 PSEN1P49768 467 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 RARRES1P49788 294 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 YARSP54577 528 aaKnown RBP22.99■■□□□ 1.27
SPSB3-208ENST00000566339 FITM2Q8N6M3 262 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 PLEKHO2Q8TD55 490 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 PCIF1Q9H4Z3 704 aa22.99■■□□□ 1.27
SPSB3-208ENST00000566339 PRPF4O43172 522 aaKnown RBP eCLIP22.98■■□□□ 1.27
SPSB3-208ENST00000566339 HNRNPCL1O60812 293 aaKnown RBP22.98■■□□□ 1.27
SPSB3-208ENST00000566339 GHRHRQ02643 423 aa22.98■■□□□ 1.27
SPSB3-208ENST00000566339 TCP10Q12799 353 aa22.98■■□□□ 1.27
SPSB3-208ENST00000566339 SETDB1Q15047 1291 aa22.98■■□□□ 1.27
SPSB3-208ENST00000566339 LRRC14Q15048 493 aa22.98■■□□□ 1.27
SPSB3-208ENST00000566339 SMYD5Q6GMV2 418 aa22.98■■□□□ 1.27
SPSB3-208ENST00000566339 FBXL13Q8NEE6 735 aa22.98■■□□□ 1.27
SPSB3-208ENST00000566339 C1orf54Q8WWF1 131 aa22.98■■□□□ 1.27
SPSB3-208ENST00000566339 FBXL18Q96ME1 805 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms