RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 HLA-DRAP01903 254 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 DLATP10515 647 aaKnown RBP9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 TNNI1P19237 187 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 CST5P28325 142 aaPredicted RBP9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 MAP2K2P36507 400 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 ACOT2P49753 483 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 HADHBP55084 474 aaKnown RBP9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 PURAQ00577 322 aaKnown RBP9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 FSCN1Q16658 493 aaKnown RBP9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 WHAMMP3Q1A5X7 153 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 DEFB115Q30KQ5 88 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 DCAF4L1Q3SXM0 396 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 ZNF568Q3ZCX4 644 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 PRAMEF19Q5SWL8 479 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 TDRD10Q5VZ19 366 aaKnown RBP9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 PPP1R2P3Q6NXS1 205 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 NFRKBQ6P4R8 1299 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 RPAINQ86UA6 219 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 SESTD1Q86VW0 696 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 CAPNS2Q96L46 248 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 KREMEN1Q96MU8 473 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 NOX5Q96PH1 765 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 ZIC5Q96T25 663 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 AGPAT1Q99943 283 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 FDXACB1Q9BRP7 624 aaPredicted RBP9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 TCHPQ9BT92 498 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 GCOM2Q9BZD3 368 aaPredicted RBP9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 IRX2Q9BZI1 471 aaPredicted RBP9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 MINDY3Q9H8M7 445 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 TOPORSQ9NS56 1045 aaPredicted RBP9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 C1orf112Q9NSG2 853 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 ANKFY1Q9P2R3 1169 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 NOCTQ9UK39 431 aaKnown RBP9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 AKT3Q9Y243 479 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 JRKLQ9Y4A0 524 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 PCDHGC5Q9Y5F6 944 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 NCANO14594 1321 aa9.55□□□□□ -0.88
LSM3P5-201ENST00000566307 ANK1P16157 1881 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 TSPAN1O60635 241 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 GPR32O75388 356 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 URI1O94763 535 aaPredicted RBP9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 VNN1O95497 513 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 STAU1O95793 577 aaKnown RBP9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 ABL1P00519 1130 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 ASS1P00966 412 aaKnown RBP9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 H2AFZP0C0S5 128 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 IQCF3P0C7M6 154 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 TMEM253P0C7T8 217 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 HOXD10P28358 340 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 MATR3P43243 847 aaKnown RBP eCLIP9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 FLT3LGP49771 235 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 WNT7BP56706 349 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 IGBP1P78318 339 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 SP3Q02447 781 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 DUOXA2Q1HG44 320 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 ZBTB41Q5SVQ8 909 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 EEF1DP3Q658K8 133 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 CYP4F22Q6NT55 531 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 TAF2Q6P1X5 1199 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 H2AFVQ71UI9 128 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 TRAPPC11Q7Z392 1133 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 PPM1KQ8N3J5 372 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 UBR7Q8N806 425 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 CEP112Q8N8E3 955 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 TRPV1Q8NER1 839 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 LNX1Q8TBB1 728 aaPredicted RBP9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 TRIB2Q92519 343 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 POP1Q99575 1024 aaKnown RBP9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 MTG1Q9BT17 334 aaPredicted RBP9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 ISCUQ9H1K1 167 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 PDZD7Q9H5P4 517 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 VRTNQ9H8Y1 702 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 PLEKHA5Q9HAU0 1116 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 SPC25Q9HBM1 224 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 SETD4Q9NVD3 440 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 TRIM10Q9UDY6 481 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 DERAQ9Y315 318 aa9.54□□□□□ -0.88
LSM3P5-201ENST00000566307 RALGAPA2Q2PPJ7 1873 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 C17orf102A2RUQ5 167 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 ANKRD62A6NC57 917 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 EFCAB8A8MWE9 144 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 B4GALT5O43286 388 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 GJB1P08034 283 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 CYP2C9P11712 490 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 DARSP14868 501 aaKnown RBP9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 ARF4P18085 180 aaPredicted RBP9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 TNFAIP3P21580 790 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 TNFSF9P41273 254 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 GRM5P41594 1212 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 PIK3CAP42336 1068 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 APLP1P51693 650 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 PRMT2P55345 433 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 FOXK1P85037 733 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 CDR2Q01850 454 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 ARID5AQ03989 594 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 ITIH3Q06033 890 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 NCBP1Q09161 790 aaKnown RBP9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 BIRC3Q13489 604 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 ENOX2Q16206 610 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms