RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 RTL10Q7L3V2 364 aa18.15■□□□□ 0.5
TSR3-202ENST00000566296 PJA1Q8NG27 643 aa18.15■□□□□ 0.5
TSR3-202ENST00000566296 SNX29Q8TEQ0 813 aa18.15■□□□□ 0.5
TSR3-202ENST00000566296 PPP1R10Q96QC0 940 aaKnown RBP18.15■□□□□ 0.5
TSR3-202ENST00000566296 LRWD1Q9UFC0 647 aa18.15■□□□□ 0.5
TSR3-202ENST00000566296 KCNH3Q9ULD8 1083 aa18.15■□□□□ 0.5
TSR3-202ENST00000566296 KIAA1024Q9UPX6 916 aa18.15■□□□□ 0.5
TSR3-202ENST00000566296 TNFSF13BQ9Y275 285 aa18.15■□□□□ 0.5
TSR3-202ENST00000566296 CDY1Q9Y6F8 540 aa18.15■□□□□ 0.5
TSR3-202ENST00000566296 CACNA1IQ9P0X4 2223 aa18.15■□□□□ 0.5
TSR3-202ENST00000566296 CITO14578 2027 aa18.15■□□□□ 0.5
TSR3-202ENST00000566296 CCDC169A6NNP5 214 aa18.14■□□□□ 0.49
TSR3-202ENST00000566296 K7ERI5 159 aa18.14■□□□□ 0.49
TSR3-202ENST00000566296 TKTP29401 623 aaKnown RBP18.14■□□□□ 0.49
TSR3-202ENST00000566296 CLCNKBP51801 687 aa18.14■□□□□ 0.49
TSR3-202ENST00000566296 GPC5P78333 572 aa18.14■□□□□ 0.49
TSR3-202ENST00000566296 PFKPQ01813 784 aa18.14■□□□□ 0.49
TSR3-202ENST00000566296 DMP1Q13316 513 aaPredicted RBP18.14■□□□□ 0.49
TSR3-202ENST00000566296 RABEP1Q15276 862 aa18.14■□□□□ 0.49
TSR3-202ENST00000566296 FBXO18Q8NFZ0 1043 aa18.14■□□□□ 0.49
TSR3-202ENST00000566296 ITFG1Q8TB96 612 aa18.14■□□□□ 0.49
TSR3-202ENST00000566296 KIF2CQ99661 725 aa18.14■□□□□ 0.49
TSR3-202ENST00000566296 RPP25Q9BUL9 199 aaKnown RBP18.14■□□□□ 0.49
TSR3-202ENST00000566296 MRPL4Q9BYD3 311 aaKnown RBP18.14■□□□□ 0.49
TSR3-202ENST00000566296 FOXQ1Q9C009 403 aa18.14■□□□□ 0.49
TSR3-202ENST00000566296 DDX19AQ9NUU7 478 aaKnown RBP18.14■□□□□ 0.49
TSR3-202ENST00000566296 SLC38A7Q9NVC3 462 aa18.14■□□□□ 0.49
TSR3-202ENST00000566296 BACE2Q9Y5Z0 518 aa18.14■□□□□ 0.49
TSR3-202ENST00000566296 FANCMQ8IYD8 2048 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 GRM5P41594 1212 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 PEX3P56589 373 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 STARD6P59095 220 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 PRKCQQ04759 706 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 MLF2Q15773 248 aaPredicted RBP18.13■□□□□ 0.49
TSR3-202ENST00000566296 ECM1Q16610 540 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 UPP1Q16831 310 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 C1orf210Q8IVY1 113 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 NPAS3Q8IXF0 933 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 DDX27Q96GQ7 796 aaKnown RBP18.13■□□□□ 0.49
TSR3-202ENST00000566296 CDT1Q9H211 546 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 GOLGA2P5Q9HBQ8 144 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 POLD4Q9HCU8 107 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 MRPS23Q9Y3D9 190 aaKnown RBP18.13■□□□□ 0.49
TSR3-202ENST00000566296 R4GN57 208 aa18.13■□□□□ 0.49
TSR3-202ENST00000566296 NOTCH4Q99466 2003 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 LRG1P02750 347 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 BRCC3P46736 316 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 ID4P47928 161 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 SNW1Q13573 536 aaKnown RBP18.12■□□□□ 0.49
TSR3-202ENST00000566296 NBR1Q14596 966 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 CEP120Q8N960 986 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 ING5Q8WYH8 240 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 DRC1Q96MC2 740 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 HINFPQ9BQA5 517 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 KXD1Q9BQD3 176 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 BCO2Q9BYV7 579 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 TMEM134Q9H6X4 195 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 HCFC1R1Q9NWW0 138 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 DLGAP2Q9P1A6 1054 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 DNMT3BQ9UBC3 853 aaKnown RBP18.12■□□□□ 0.49
TSR3-202ENST00000566296 VPS13AQ96RL7 3174 aa18.12■□□□□ 0.49
TSR3-202ENST00000566296 OTOGLQ3ZCN5 2332 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 SMIM28A0A1B0GU29 152 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 KANSL1LA0AUZ9 987 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 I3L4J1 428 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 SP9P0CG40 484 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 ELF1P32519 619 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 NPTX2P47972 431 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 OSTNP61366 133 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 UBXN2BQ14CS0 331 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 KRT79Q5XKE5 535 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 ERMP1Q7Z2K6 904 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 C3orf58Q8NDZ4 430 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 ZSCAN31Q96LW9 406 aaPredicted RBP18.11■□□□□ 0.49
TSR3-202ENST00000566296 ACO2Q99798 780 aaKnown RBP18.11■□□□□ 0.49
TSR3-202ENST00000566296 KMT5AQ9NQR1 393 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 SH2B1Q9NRF2 756 aaPredicted RBP18.11■□□□□ 0.49
TSR3-202ENST00000566296 DNM3Q9UQ16 869 aa18.11■□□□□ 0.49
TSR3-202ENST00000566296 PODXLO00592 558 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 PRRG1O14668 218 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 SYN3O14994 580 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 HIP1RO75146 1068 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 MAGEA9P43362 315 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 ROR1Q01973 937 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 PDIA5Q14554 519 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 SLC44A4Q53GD3 710 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 VARS2Q5ST30 1063 aaKnown RBP18.1■□□□□ 0.49
TSR3-202ENST00000566296 RSPO2Q6UXX9 243 aaPredicted RBP18.1■□□□□ 0.49
TSR3-202ENST00000566296 IGSF22Q8N9C0 903 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 ACAP3Q96P50 834 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 TCHPQ9BT92 498 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 ARHGAP28Q9P2N2 729 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 NUB1Q9Y5A7 615 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 MYH11P35749 1972 aa18.1■□□□□ 0.49
TSR3-202ENST00000566296 E9PMD0 336 aa18.09■□□□□ 0.49
TSR3-202ENST00000566296 LAD1O00515 517 aa18.09■□□□□ 0.49
TSR3-202ENST00000566296 RHOP08100 348 aa18.09■□□□□ 0.49
TSR3-202ENST00000566296 MCF2P10911 925 aa18.09■□□□□ 0.49
TSR3-202ENST00000566296 HARSP12081 509 aaKnown RBP18.09■□□□□ 0.49
TSR3-202ENST00000566296 SOX4Q06945 474 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms