RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 PSMD5Q16401 504 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 IER5LQ5T953 404 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 ANKS3Q6ZW76 656 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 PALB2Q86YC2 1186 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 PRSS33Q8NF86 280 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 ACAP3Q96P50 834 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 TARS2Q9BW92 718 aaKnown RBP16.63■□□□□ 0.25
CMTM3-212ENST00000566121 CXCL16Q9H2A7 254 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 AVENQ9NQS1 362 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-212ENST00000566121 WNT16Q9UBV4 365 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 GDAQ9Y2T3 454 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 C2orf16Q68DN1 1984 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 DOCK8Q8NF50 2099 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 TBC1D4O60343 1298 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 PIGRP01833 764 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 ADRB2P07550 413 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 LAMP2P13473 410 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 PAX3P23760 479 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 NCKAP1LP55160 1127 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 POU5F1Q01860 360 aaKnown RBP16.62■□□□□ 0.25
CMTM3-212ENST00000566121 MRPL58Q14197 206 aaKnown RBP16.62■□□□□ 0.25
CMTM3-212ENST00000566121 ZNF568Q3ZCX4 644 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 ARSHQ5FYA8 562 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 SLC8B1Q6J4K2 584 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 B3GALT6Q96L58 329 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 SNX27Q96L92 541 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 POLD4Q9HCU8 107 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 KCNH3Q9ULD8 1083 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 USP20Q9Y2K6 914 aa16.62■□□□□ 0.25
CMTM3-212ENST00000566121 PLXNA3P51805 1871 aa16.61■□□□□ 0.25
CMTM3-212ENST00000566121 VWA3AA6NCI4 1184 aa16.61■□□□□ 0.25
CMTM3-212ENST00000566121 ASGR2P07307 311 aa16.61■□□□□ 0.25
CMTM3-212ENST00000566121 CYP3A5P20815 502 aa16.61■□□□□ 0.25
CMTM3-212ENST00000566121 UBA7P41226 1012 aa16.61■□□□□ 0.25
CMTM3-212ENST00000566121 CLCNKBP51801 687 aa16.61■□□□□ 0.25
CMTM3-212ENST00000566121 STRN3Q13033 797 aa16.61■□□□□ 0.25
CMTM3-212ENST00000566121 ASTLQ6HA08 431 aaPredicted RBP16.61■□□□□ 0.25
CMTM3-212ENST00000566121 FEZF2Q8TBJ5 459 aa16.61■□□□□ 0.25
CMTM3-212ENST00000566121 CALML4Q96GE6 196 aa16.61■□□□□ 0.25
CMTM3-212ENST00000566121 CDK5RAP3Q96JB5 506 aa16.61■□□□□ 0.25
CMTM3-212ENST00000566121 OXCT2Q9BYC2 517 aaPredicted RBP16.61■□□□□ 0.25
CMTM3-212ENST00000566121 CCSER1Q9C0I3 900 aa16.61■□□□□ 0.25
CMTM3-212ENST00000566121 ST6GALNAC4Q9H4F1 302 aa16.61■□□□□ 0.25
CMTM3-212ENST00000566121 SLC16A4O15374 487 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 CLDN3O15551 220 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 GALR2O43603 387 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-212ENST00000566121 XYLBO75191 536 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 ABLIM3O94929 683 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 SP100P23497 879 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-212ENST00000566121 VCPP55072 806 aaKnown RBP16.6■□□□□ 0.25
CMTM3-212ENST00000566121 NOLC1Q14978 699 aaKnown RBP eCLIP16.6■□□□□ 0.25
CMTM3-212ENST00000566121 ZBTB6Q15916 424 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 LIN9Q5TKA1 542 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 PRSS55Q6UWB4 352 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-212ENST00000566121 SLC44A3Q8N4M1 653 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 CEP120Q8N960 986 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 ZNF461Q8TAF7 563 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 INTS4Q96HW7 963 aaKnown RBP16.6■□□□□ 0.25
CMTM3-212ENST00000566121 ZMAT2Q96NC0 199 aaKnown RBP16.6■□□□□ 0.25
CMTM3-212ENST00000566121 MYADMQ96S97 322 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 RTP3Q9BQQ7 232 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 TCHPQ9BT92 498 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 KMT2EQ8IZD2 1858 aa16.6■□□□□ 0.25
CMTM3-212ENST00000566121 TRIP11Q15643 1979 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 ARHGEF37A1IGU5 675 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 PROB1E7EW31 1015 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 MICAL2O94851 1124 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 CLTAP09496 248 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 RPL17P18621 184 aaKnown RBP16.59■□□□□ 0.25
CMTM3-212ENST00000566121 LIG1P18858 919 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 MRE11P49959 708 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 SLC10A6Q3KNW5 377 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 TPGS2Q68CL5 300 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 RABGGTAQ92696 567 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 PIDD1Q9HB75 910 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 SLC2A4RGQ9NR83 387 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 BLOC1S4Q9NUP1 217 aa16.59■□□□□ 0.25
CMTM3-212ENST00000566121 PTPRZ1P23471 2315 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-212ENST00000566121 TTC26A0AVF1 554 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 SFI1A8K8P3 1242 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 H7C4K7 107 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 C8AP07357 584 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 SPATA31D3P0C874 917 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 SRFP11831 508 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 AOC1P19801 751 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 LRPAP1P30533 357 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 OR1D2P34982 312 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 DDIT3P35638 169 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 SOX4Q06945 474 aaPredicted RBP16.58■□□□□ 0.24
CMTM3-212ENST00000566121 PPM1LQ5SGD2 360 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 AXDND1Q5T1B0 1012 aaPredicted RBP16.58■□□□□ 0.24
CMTM3-212ENST00000566121 PHLDB3Q6NSJ2 640 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 SPATA31D4Q6ZUB0 917 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 HAUS6Q7Z4H7 955 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 CEP57Q86XR8 500 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 CD302Q8IX05 232 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 C3orf58Q8NDZ4 430 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 SUSD3Q96L08 255 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 PARVGQ9HBI0 331 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 CACNG4Q9UBN1 327 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms