RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 FBXL5Q9UKA1 691 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 IPPQ9Y573 584 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 FHOD1Q9Y613 1164 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 PDCD11Q14690 1871 aaKnown RBP20.25■□□□□ 0.83
COMMD4-213ENST00000565834 TANC1Q9C0D5 1861 aa20.25■□□□□ 0.83
COMMD4-213ENST00000565834 PHACTR2O75167 634 aa20.25■□□□□ 0.83
COMMD4-213ENST00000565834 TNNC2P02585 160 aa20.25■□□□□ 0.83
COMMD4-213ENST00000565834 PIK3CAP42336 1068 aa20.25■□□□□ 0.83
COMMD4-213ENST00000565834 TLE2Q04725 743 aa20.25■□□□□ 0.83
COMMD4-213ENST00000565834 MBTPS1Q14703 1052 aa20.25■□□□□ 0.83
COMMD4-213ENST00000565834 TSR1Q2NL82 804 aaKnown RBP20.25■□□□□ 0.83
COMMD4-213ENST00000565834 JADE1Q6IE81 842 aa20.25■□□□□ 0.83
COMMD4-213ENST00000565834 RRAGAQ7L523 313 aa20.25■□□□□ 0.83
COMMD4-213ENST00000565834 BAP1Q92560 729 aa20.25■□□□□ 0.83
COMMD4-213ENST00000565834 PAWRQ96IZ0 340 aaKnown RBP20.25■□□□□ 0.83
COMMD4-213ENST00000565834 DAAM1Q9Y4D1 1078 aa20.25■□□□□ 0.83
COMMD4-213ENST00000565834 RECQL4O94761 1208 aa20.24■□□□□ 0.83
COMMD4-213ENST00000565834 HLA-DRAP01903 254 aa20.24■□□□□ 0.83
COMMD4-213ENST00000565834 NFICP08651 508 aa20.24■□□□□ 0.83
COMMD4-213ENST00000565834 RFX1P22670 979 aa20.24■□□□□ 0.83
COMMD4-213ENST00000565834 CCZ1BP86790 482 aa20.24■□□□□ 0.83
COMMD4-213ENST00000565834 CCZ1P86791 482 aaPredicted RBP20.24■□□□□ 0.83
COMMD4-213ENST00000565834 SMG8Q8ND04 991 aaKnown RBP20.24■□□□□ 0.83
COMMD4-213ENST00000565834 SNX27Q96L92 541 aa20.24■□□□□ 0.83
COMMD4-213ENST00000565834 BAG1Q99933 345 aaPredicted RBP20.24■□□□□ 0.83
COMMD4-213ENST00000565834 TMX1Q9H3N1 280 aa20.24■□□□□ 0.83
COMMD4-213ENST00000565834 FAM105AQ9NUU6 356 aa20.24■□□□□ 0.83
COMMD4-213ENST00000565834 PCDHB2Q9Y5E7 798 aa20.24■□□□□ 0.83
COMMD4-213ENST00000565834 LRRN2O75325 713 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 SKILP12757 684 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 DSC3Q14574 896 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 TMEM132DQ14C87 1099 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 IQCEQ6IPM2 695 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 PDXDC1Q6P996 788 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 GJB7Q6PEY0 223 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 TRAPPC11Q7Z392 1133 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 NT5DC4Q86YG4 428 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 HACE1Q8IYU2 909 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 NUCKS1Q9H1E3 243 aaKnown RBP20.23■□□□□ 0.83
COMMD4-213ENST00000565834 PARP2Q9UGN5 583 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 ATP11BQ9Y2G3 1177 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 C2CD2Q9Y426 696 aa20.23■□□□□ 0.83
COMMD4-213ENST00000565834 LRRC53A6NM62 1247 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 ZC3H11AO75152 810 aaKnown RBP eCLIP20.22■□□□□ 0.83
COMMD4-213ENST00000565834 VNN1O95497 513 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 AKAP5P24588 427 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 RAB27AP51159 221 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 FAAP100Q0VG06 881 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 RAPGEF1Q13905 1077 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 PHLDB3Q6NSJ2 640 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 NT5C1BQ96P26 610 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 SPAG5Q96R06 1193 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 NAA15Q9BXJ9 866 aaKnown RBP20.22■□□□□ 0.83
COMMD4-213ENST00000565834 IFIH1Q9BYX4 1025 aaKnown RBP20.22■□□□□ 0.83
COMMD4-213ENST00000565834 HIPK3Q9H422 1215 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 ZNHIT6Q9NWK9 470 aaKnown RBP20.22■□□□□ 0.83
COMMD4-213ENST00000565834 DNAJC12Q9UKB3 198 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 MGEA5O60502 916 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 NCOA4Q13772 614 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 WDR44Q5JSH3 913 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 NECAB2Q7Z6G3 386 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 TMEM139Q8IV31 216 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 KIF12Q96FN5 646 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 ADAM2Q99965 735 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 TRAIPQ9BWF2 469 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 RNF39Q9H2S5 420 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.22■□□□□ 0.83
COMMD4-213ENST00000565834 AJAP1Q9UKB5 411 aaPredicted RBP20.22■□□□□ 0.83
COMMD4-213ENST00000565834 MYO6Q9UM54 1294 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 ZKSCAN5Q9Y2L8 839 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 DERAQ9Y315 318 aa20.22■□□□□ 0.83
COMMD4-213ENST00000565834 FECHP22830 423 aa20.21■□□□□ 0.83
COMMD4-213ENST00000565834 TRPC3Q13507 836 aa20.21■□□□□ 0.83
COMMD4-213ENST00000565834 ALKAL1Q6UXT8 129 aa20.21■□□□□ 0.83
COMMD4-213ENST00000565834 ARHGEF19Q8IW93 802 aa20.21■□□□□ 0.83
COMMD4-213ENST00000565834 PI4K2AQ9BTU6 479 aa20.21■□□□□ 0.83
COMMD4-213ENST00000565834 IMPG2Q9BZV3 1241 aa20.21■□□□□ 0.83
COMMD4-213ENST00000565834 UBE2TQ9NPD8 197 aaPredicted RBP20.21■□□□□ 0.83
COMMD4-213ENST00000565834 C1orf112Q9NSG2 853 aa20.21■□□□□ 0.83
COMMD4-213ENST00000565834 CNTN3Q9P232 1028 aa20.21■□□□□ 0.83
COMMD4-213ENST00000565834 PLAGL2Q9UPG8 496 aa20.21■□□□□ 0.83
COMMD4-213ENST00000565834 ITGA4P13612 1032 aa20.2■□□□□ 0.82
COMMD4-213ENST00000565834 HNRNPH3P31942 346 aaKnown RBP20.2■□□□□ 0.82
COMMD4-213ENST00000565834 SFMBT2Q5VUG0 894 aa20.2■□□□□ 0.82
COMMD4-213ENST00000565834 PPM1KQ8N3J5 372 aa20.2■□□□□ 0.82
COMMD4-213ENST00000565834 STK33Q9BYT3 514 aa20.2■□□□□ 0.82
COMMD4-213ENST00000565834 KLK14Q9P0G3 267 aa20.2■□□□□ 0.82
COMMD4-213ENST00000565834 UMODL1Q5DID0 1318 aa20.2■□□□□ 0.82
COMMD4-213ENST00000565834 SCN5AQ14524 2016 aa20.2■□□□□ 0.82
COMMD4-213ENST00000565834 NBNO60934 754 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 ZNF623O75123 536 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 CLSTN1O94985 981 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 SKIP12755 728 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 JAM2P57087 298 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 MEA1Q16626 185 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 LRRC26Q2I0M4 334 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 CYP26C1Q6V0L0 522 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 C1orf127Q8N9H9 656 aa20.19■□□□□ 0.82
COMMD4-213ENST00000565834 SYN2Q92777 582 aaPredicted RBP20.19■□□□□ 0.82
COMMD4-213ENST00000565834 TSPAN18Q96SJ8 248 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms