RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 RPL9P32969 192 aaKnown RBP16.82■□□□□ 0.28
COMMD4-212ENST00000565517 GLUD2P49448 558 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 CASP5P51878 434 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 DSG1Q02413 1049 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 ELAVL2Q12926 359 aaKnown RBP16.82■□□□□ 0.28
COMMD4-212ENST00000565517 UPP1Q16831 310 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 USP41Q3LFD5 358 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 SEZ6Q53EL9 994 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 PTCRAQ6ISU1 281 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-212ENST00000565517 UNC13DQ70J99 1090 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 PPFIBP1Q86W92 1011 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 CD302Q8IX05 232 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 TMEM87AQ8NBN3 555 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 VN1R2Q8NFZ6 395 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 AUTS2Q8WXX7 1259 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 EMILIN2Q9BXX0 1053 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 TMEM206Q9H813 350 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 RPF1Q9H9Y2 349 aaKnown RBP16.82■□□□□ 0.28
COMMD4-212ENST00000565517 CACNG4Q9UBN1 327 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 SERTAD1Q9UHV2 236 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 CD207Q9UJ71 328 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 CPSF3Q9UKF6 684 aaKnown RBP16.82■□□□□ 0.28
COMMD4-212ENST00000565517 VWA8A3KMH1 1905 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 DLL1O00548 723 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 KIF4AO95239 1232 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 C1RP00736 705 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 MYL1P05976 194 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 CXCL8P10145 99 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 MYBP10242 640 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 HOXB8P17481 243 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-212ENST00000565517 CA8P35219 290 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 TNFSF9P41273 254 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 SYKP43405 635 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 CLCNKBP51801 687 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 EHHADHQ08426 723 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 KCNA1Q09470 495 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 SMAD4Q13485 552 aaKnown RBP16.81■□□□□ 0.28
COMMD4-212ENST00000565517 KIAA1841Q6NSI8 718 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 ADAMTS19Q8TE59 1207 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 RABGGTAQ92696 567 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 CASP10Q92851 521 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 KLHL5Q96PQ7 755 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 RXFP1Q9HBX9 757 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.81■□□□□ 0.28
COMMD4-212ENST00000565517 AGO2Q9UKV8 859 aaKnown RBP16.81■□□□□ 0.28
COMMD4-212ENST00000565517 CIZ1Q9ULV3 898 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-212ENST00000565517 BARX2Q9UMQ3 279 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-212ENST00000565517 HCFC2Q9Y5Z7 792 aa16.81■□□□□ 0.28
COMMD4-212ENST00000565517 VCANP13611 3396 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 EIF3DO15371 548 aaKnown RBP eCLIP16.8■□□□□ 0.28
COMMD4-212ENST00000565517 MBTPS2O43462 519 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 B3GAT3O94766 335 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 CNPP09543 421 aaKnown RBP16.8■□□□□ 0.28
COMMD4-212ENST00000565517 GARTP22102 1010 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 ADSSP30520 456 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 AFMP43652 599 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 PPP2R3AQ06190 1150 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 SOX4Q06945 474 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-212ENST00000565517 ZBTB6Q15916 424 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 ENOX2Q16206 610 aaKnown RBP16.8■□□□□ 0.28
COMMD4-212ENST00000565517 SYCP3Q8IZU3 236 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 SMRP1Q8NCR6 262 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 SLC22A17Q8WUG5 538 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 POMGNT1Q8WZA1 660 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 PAGE5Q96GU1 130 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 FGFBP2Q9BYJ0 223 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 FNIP2Q9P278 1114 aa16.8■□□□□ 0.28
COMMD4-212ENST00000565517 LACTBL1A8MY62 500 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 TISP43B9A030 160 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 C2CD2LO14523 706 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 XPOTO43592 962 aaKnown RBP16.79■□□□□ 0.28
COMMD4-212ENST00000565517 TRAPPC3O43617 180 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 PRPF6O94906 941 aaKnown RBP16.79■□□□□ 0.28
COMMD4-212ENST00000565517 LDHAP00338 332 aaKnown RBP16.79■□□□□ 0.28
COMMD4-212ENST00000565517 CYP3A5P20815 502 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 KLRC2P26717 231 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 NDUFA8P51970 172 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 RBM10P98175 930 aaKnown RBP16.79■□□□□ 0.28
COMMD4-212ENST00000565517 CREMQ03060 361 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 CUL4BQ13620 913 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 SMAD2Q15796 467 aaKnown RBP16.79■□□□□ 0.28
COMMD4-212ENST00000565517 FAM26FQ5R3K3 315 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 ZBTB41Q5SVQ8 909 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 ANKRD54Q6NXT1 300 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 PDXDC1Q6P996 788 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 CD300LGQ6UXG3 332 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 EPM2AIP1Q7L775 607 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-212ENST00000565517 ZNF507Q8TCN5 953 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 HASPINQ8TF76 798 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 UHRF1Q96T88 793 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-212ENST00000565517 TTPALQ9BTX7 342 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 BLZF1Q9H2G9 400 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 ASB7Q9H672 318 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 GOLGA2P5Q9HBQ8 144 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 GDPD2Q9HCC8 539 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 UBQLN1Q9UMX0 589 aaKnown RBP16.79■□□□□ 0.28
COMMD4-212ENST00000565517 DERAQ9Y315 318 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 NCOR1O75376 2440 aa16.79■□□□□ 0.28
COMMD4-212ENST00000565517 PLXNA3P51805 1871 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 UBE4BO95155 1302 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms