RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 DDX20Q9UHI6 824 aaKnown RBP5.74□□□□□ -1.49
CHD9-215ENST00000565442 FAM171A2A8MVW0 826 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 ADCY6O43306 1168 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 CTNND1O60716 968 aaKnown RBP5.73□□□□□ -1.49
CHD9-215ENST00000565442 DTNBO60941 627 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 ECHS1P30084 290 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 SLC6A9P48067 706 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 ADCY7P51828 1080 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 KRTAP10-11P60412 298 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 CNGB1Q14028 1251 aaPredicted RBP5.73□□□□□ -1.49
CHD9-215ENST00000565442 TOB2Q14106 344 aaPredicted RBP5.73□□□□□ -1.49
CHD9-215ENST00000565442 GRM3Q14832 879 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 MST1LQ2TV78 715 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 C19orf54Q5BKX5 351 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 ZKSCAN2Q63HK3 967 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 CAMKK1Q8N5S9 505 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 FBXO18Q8NFZ0 1043 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 CCHCR1Q8TD31 782 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 ZNF480Q8WV37 535 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 RUNDC1Q96C34 613 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 TIFAQ96CG3 184 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 UHRF1Q96T88 793 aaPredicted RBP5.73□□□□□ -1.49
CHD9-215ENST00000565442 ACO2Q99798 780 aaKnown RBP5.73□□□□□ -1.49
CHD9-215ENST00000565442 SLC6A15Q9H2J7 730 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 LDAHQ9H6V9 325 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 NCDNQ9UBB6 729 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 SIK3Q9Y2K2 1263 aa5.73□□□□□ -1.49
CHD9-215ENST00000565442 MASP2O00187 686 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 ERC2O15083 957 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 ITGA10O75578 1167 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 ENDOD1O94919 500 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 VSIG10L2P0DP72 767 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 DUSP2Q05923 314 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 GLCCI1Q86VQ1 547 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 DGKHQ86XP1 1220 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 PQLC1Q8N2U9 271 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 LILRA3Q8N6C8 439 aaPredicted RBP5.72□□□□□ -1.49
CHD9-215ENST00000565442 ZBTB34Q8NCN2 500 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 REPS2Q8NFH8 660 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 PPP1R35Q8TAP8 253 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 NTN5Q8WTR8 489 aaPredicted RBP5.72□□□□□ -1.49
CHD9-215ENST00000565442 HAS1Q92839 578 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 MIEF2Q96C03 454 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 GPHA2Q96T91 129 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 PDCD2LQ9BRP1 358 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 RIOX1Q9H6W3 641 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 TDP1Q9NUW8 608 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 GPRC5DQ9NZD1 345 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 TRPS1Q9UHF7 1281 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 PCDHB1Q9Y5F3 818 aa5.72□□□□□ -1.49
CHD9-215ENST00000565442 A0A1W2PRX2 142 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 JUNP05412 331 aaKnown RBP5.71□□□□□ -1.5
CHD9-215ENST00000565442 SREBF1P36956 1147 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 CASRP41180 1078 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 MAN2A2P49641 1150 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 WNT3AP56704 352 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 C21orf58P58505 322 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 DSC2Q02487 901 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 DRC7Q8IY82 874 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 CCDC146Q8IYE0 955 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 OR5M3Q8NGP4 307 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 STON2Q8WXE9 905 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 C1GALT1C1Q96EU7 318 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 PRDM11Q9NQV5 511 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 C1orf112Q9NSG2 853 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 ZNHIT2Q9UHR6 403 aa5.71□□□□□ -1.5
CHD9-215ENST00000565442 CFAP20Q9Y6A4 193 aaKnown RBP5.71□□□□□ -1.5
CHD9-215ENST00000565442 FRMPD2Q68DX3 1309 aaPredicted RBP5.71□□□□□ -1.5
CHD9-215ENST00000565442 LRRC14BA6NHZ5 514 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 CAND2O75155 1236 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 ALDH2P05091 517 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 GYPEP15421 78 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 ADAM8P78325 824 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 SAFB2Q14151 953 aaKnown RBP eCLIP5.7□□□□□ -1.5
CHD9-215ENST00000565442 GAGE13Q4V321 117 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 GJC2Q5T442 439 aaPredicted RBP5.7□□□□□ -1.5
CHD9-215ENST00000565442 PPP4R3AQ6IN85 833 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 DENND1CQ8IV53 801 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 OR7D4Q8NG98 312 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 MDM1Q8TC05 714 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 RABGGTAQ92696 567 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 CLPTM1LQ96KA5 538 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 SENP6Q9GZR1 1112 aaPredicted RBP5.7□□□□□ -1.5
CHD9-215ENST00000565442 MANSC1Q9H8J5 431 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 BCO1Q9HAY6 547 aa5.7□□□□□ -1.5
CHD9-215ENST00000565442 ADARB2Q9NS39 739 aaKnown RBP5.7□□□□□ -1.5
CHD9-215ENST00000565442 MTSS1O43312 755 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 GASTP01350 101 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 FTLP02792 175 aaPredicted RBP5.69□□□□□ -1.5
CHD9-215ENST00000565442 KRT18P05783 430 aaKnown RBP5.69□□□□□ -1.5
CHD9-215ENST00000565442 CRHR1P34998 444 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 PTPN7P35236 360 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 CDC42EP1Q00587 391 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 TARDBPQ13148 414 aaKnown RBP eCLIP5.69□□□□□ -1.5
CHD9-215ENST00000565442 GBX1Q14549 363 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 LLGL1Q15334 1064 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 PRAMEF14Q5SWL7 426 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 SYCE2Q6PIF2 218 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 KSR2Q6VAB6 950 aa5.69□□□□□ -1.5
CHD9-215ENST00000565442 OVCH2Q7RTZ1 564 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms