RNA–Protein interactions for RNA: ENST00000564784.5

NEIL1-206, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 2,019 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-206ENST00000564784 PTP4A2Q12974 167 aa23.2■■□□□ 1.3
NEIL1-206ENST00000564784 ZBED3Q96IU2 234 aaPredicted RBP23.2■■□□□ 1.3
NEIL1-206ENST00000564784 SCP2P22307 547 aa23.2■■□□□ 1.3
NEIL1-206ENST00000564784 CHKAP35790 457 aa23.2■■□□□ 1.3
NEIL1-206ENST00000564784 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.2■■□□□ 1.3
NEIL1-206ENST00000564784 CCDC25Q86WR0 208 aa23.2■■□□□ 1.3
NEIL1-206ENST00000564784 DDX27Q96GQ7 796 aaKnown RBP23.2■■□□□ 1.3
NEIL1-206ENST00000564784 SNF8Q96H20 258 aa23.2■■□□□ 1.3
NEIL1-206ENST00000564784 DCLK3Q9C098 648 aa23.2■■□□□ 1.3
NEIL1-206ENST00000564784 PXMP2Q9NR77 195 aa23.2■■□□□ 1.3
NEIL1-206ENST00000564784 SLC12A4Q9UP95 1085 aa23.2■■□□□ 1.3
NEIL1-206ENST00000564784 ZBTB12Q9Y330 459 aaPredicted RBP23.2■■□□□ 1.3
NEIL1-206ENST00000564784 NEU2Q9Y3R4 380 aa23.2■■□□□ 1.3
NEIL1-206ENST00000564784 TCEA3O75764 348 aa23.19■■□□□ 1.3
NEIL1-206ENST00000564784 MYBL1P10243 752 aa23.19■■□□□ 1.3
NEIL1-206ENST00000564784 GARTP22102 1010 aa23.19■■□□□ 1.3
NEIL1-206ENST00000564784 ZNF772Q68DY9 489 aaPredicted RBP23.19■■□□□ 1.3
NEIL1-206ENST00000564784 ZNF677Q86XU0 584 aa23.19■■□□□ 1.3
NEIL1-206ENST00000564784 PARP9Q8IXQ6 854 aa23.19■■□□□ 1.3
NEIL1-206ENST00000564784 GPD1LQ8N335 351 aa23.19■■□□□ 1.3
NEIL1-206ENST00000564784 MAGEC3Q8TD91 643 aa23.19■■□□□ 1.3
NEIL1-206ENST00000564784 ZKSCAN4Q969J2 545 aaPredicted RBP23.19■■□□□ 1.3
NEIL1-206ENST00000564784 MOV10L1Q9BXT6 1211 aaKnown RBP23.19■■□□□ 1.3
NEIL1-206ENST00000564784 TRIM7Q9C029 511 aa23.19■■□□□ 1.3
NEIL1-206ENST00000564784 KIAA1683Q9H0B3 1180 aa23.19■■□□□ 1.3
NEIL1-206ENST00000564784 PDLIM7Q9NR12 457 aa23.19■■□□□ 1.3
NEIL1-206ENST00000564784 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.19■■□□□ 1.3
NEIL1-206ENST00000564784 FER1L6Q2WGJ9 1857 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 OAS1P00973 400 aaKnown RBP23.18■■□□□ 1.3
NEIL1-206ENST00000564784 MYCLP12524 364 aaPredicted RBP23.18■■□□□ 1.3
NEIL1-206ENST00000564784 CLDN10P78369 228 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 CAV1Q03135 178 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 POTEAQ6S8J7 498 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 POMGNT1Q8WZA1 660 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 ELMO3Q96BJ8 720 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 CD248Q9HCU0 757 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 HOMER3Q9NSC5 361 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 SAMD15Q9P1V8 674 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 TTC4O95801 387 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 CYP1A1P04798 512 aaPredicted RBP23.18■■□□□ 1.3
NEIL1-206ENST00000564784 GSCP56915 257 aaPredicted RBP23.18■■□□□ 1.3
NEIL1-206ENST00000564784 SNX1Q13596 522 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 LONRF1Q17RB8 773 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 CCDC38Q502W7 563 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 ZNF516Q92618 1163 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 TRIM11Q96F44 468 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 RMDN3Q96TC7 470 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 ELAC2Q9BQ52 826 aaKnown RBP23.18■■□□□ 1.3
NEIL1-206ENST00000564784 HOMER2Q9NSB8 354 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 ASIC3Q9UHC3 531 aa23.18■■□□□ 1.3
NEIL1-206ENST00000564784 ADGRA3Q8IWK6 1321 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 SORBS3O60504 671 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 CALCAP01258 141 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 KRT5P13647 590 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 RRM1P23921 792 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 RTP1P59025 263 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 BRDTQ58F21 947 aaPredicted RBP23.17■■□□□ 1.3
NEIL1-206ENST00000564784 VSTM1Q6UX27 236 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 CCDC91Q7Z6B0 441 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 FAM228AQ86W67 206 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 CCDC50Q8IVM0 306 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 GRK7Q8WTQ7 553 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 ARHGEF2Q92974 986 aaKnown RBP23.17■■□□□ 1.3
NEIL1-206ENST00000564784 PI4K2AQ9BTU6 479 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 NSRP1Q9H0G5 558 aaKnown RBP23.17■■□□□ 1.3
NEIL1-206ENST00000564784 PCDHB2Q9Y5E7 798 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 PCDHA10Q9Y5I2 948 aa23.17■■□□□ 1.3
NEIL1-206ENST00000564784 ZNF862O60290 1169 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 MGRN1O60291 552 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 CENPCQ03188 943 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 KLF1Q13351 362 aaPredicted RBP23.16■■□□□ 1.3
NEIL1-206ENST00000564784 LLGL1Q15334 1064 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 XRRA1Q6P2D8 792 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 OTUD6AQ7L8S5 288 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 TRMT1LQ7Z2T5 733 aaKnown RBP23.16■■□□□ 1.3
NEIL1-206ENST00000564784 ATG4AQ8WYN0 398 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 SNX3O60493 162 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 ACSL3O95573 720 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 VIMP08670 466 aaKnown RBP23.16■■□□□ 1.3
NEIL1-206ENST00000564784 ITGA8P53708 1063 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 SNCBQ16143 134 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 TAS1R3Q7RTX0 852 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 ATL2Q8NHH9 583 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 UMODL1Q5DID0 1318 aa23.16■■□□□ 1.3
NEIL1-206ENST00000564784 ATP2C2O75185 946 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 ATP5DP30049 168 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 IFNAR2P48551 515 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 SOX10P56693 466 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 MON1BQ7L1V2 547 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 TRPM8Q7Z2W7 1104 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 TRAIPQ9BWF2 469 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 R3HDM2Q9Y2K5 976 aaKnown RBP23.15■■□□□ 1.3
NEIL1-206ENST00000564784 PROSCO94903 275 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 GAS8O95995 478 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 BPIFB4P59827 614 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 MKRN4PQ13434 485 aaPredicted RBP23.15■■□□□ 1.3
NEIL1-206ENST00000564784 VSIG10LQ86VR7 867 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 RELL1Q8IUW5 271 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 CPA5Q8WXQ8 436 aa23.15■■□□□ 1.3
NEIL1-206ENST00000564784 CEP170P1Q96L14 293 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms