RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 SPC25Q9HBM1 224 aa4.17□□□□□ -1.74
CHD9-211ENST00000564600 FBXO34Q9NWN3 711 aa4.17□□□□□ -1.74
CHD9-211ENST00000564600 TUBD1Q9UJT1 453 aa4.17□□□□□ -1.74
CHD9-211ENST00000564600 DNM3Q9UQ16 869 aa4.17□□□□□ -1.74
CHD9-211ENST00000564600 PCDHGA9Q9Y5G4 932 aaKnown RBP4.17□□□□□ -1.74
CHD9-211ENST00000564600 PCDHGA8Q9Y5G5 932 aa4.17□□□□□ -1.74
CHD9-211ENST00000564600 PCDHGA7Q9Y5G6 932 aa4.17□□□□□ -1.74
CHD9-211ENST00000564600 PCDHGA6Q9Y5G7 932 aa4.17□□□□□ -1.74
CHD9-211ENST00000564600 PCDHGA3Q9Y5H0 932 aa4.17□□□□□ -1.74
CHD9-211ENST00000564600 SPATA31A6Q5VVP1 1343 aa4.17□□□□□ -1.74
CHD9-211ENST00000564600 TMEM200CA6NKL6 621 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 FZD9O00144 591 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 PJA2O43164 708 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 MT-CO1P00395 513 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 RAP2AP10114 183 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 RBP3P10745 1247 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 ZEB1P37275 1124 aaPredicted RBP4.16□□□□□ -1.74
CHD9-211ENST00000564600 PER3P56645 1201 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 FAPQ12884 760 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 MTMR1Q13613 665 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 TP53BP2Q13625 1128 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 STRIP1Q5VSL9 837 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 PAPD7Q5XG87 772 aaKnown RBP4.16□□□□□ -1.74
CHD9-211ENST00000564600 SYCE2Q6PIF2 218 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 UBE3BQ7Z3V4 1068 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 RD3Q7Z3Z2 195 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 CPEB3Q8NE35 698 aaKnown RBP4.16□□□□□ -1.74
CHD9-211ENST00000564600 ZFP28Q8NHY6 868 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 CCHCR1Q8TD31 782 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 NRG4Q8WWG1 115 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 JADE3Q92613 823 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 DCLRE1CQ96SD1 692 aaKnown RBP4.16□□□□□ -1.74
CHD9-211ENST00000564600 ADI1Q9BV57 179 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 WDR11Q9BZH6 1224 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 SERHL2Q9H4I8 314 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 TESQ9UGI8 421 aaKnown RBP4.16□□□□□ -1.74
CHD9-211ENST00000564600 INTUQ9ULD6 942 aa4.16□□□□□ -1.74
CHD9-211ENST00000564600 RUVBL1Q9Y265 456 aaKnown RBP4.16□□□□□ -1.74
CHD9-211ENST00000564600 AATKQ6ZMQ8 1374 aa4.15□□□□□ -1.74
CHD9-211ENST00000564600 TRIM75PA6NK02 468 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 RNASET2O00584 256 aaKnown RBP4.15□□□□□ -1.75
CHD9-211ENST00000564600 KATNA1O75449 491 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 RHOBTB3O94955 611 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 SPDEFO95238 335 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 SNRPA1P09661 255 aaKnown RBP4.15□□□□□ -1.75
CHD9-211ENST00000564600 C5AR1P21730 350 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 SLC5A3P53794 718 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 ATP8B2P98198 1209 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 SCAPQ12770 1279 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 SP140Q13342 867 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 MTM1Q13496 603 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 FAM50AQ14320 339 aaKnown RBP4.15□□□□□ -1.75
CHD9-211ENST00000564600 CLUL1Q15846 466 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 ABCB5Q2M3G0 1257 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 TSHZ3Q63HK5 1081 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 B3GNTL1Q67FW5 361 aaPredicted RBP4.15□□□□□ -1.75
CHD9-211ENST00000564600 ZNF529Q6P280 563 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 PGM2L1Q6PCE3 622 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 Q6YL49 198 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 DCBLD1Q8N8Z6 715 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 C1orf162Q8NEQ5 155 aaPredicted RBP4.15□□□□□ -1.75
CHD9-211ENST00000564600 OR56A1Q8NGH5 318 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 ASB10Q8WXI3 467 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 SENP6Q9GZR1 1112 aaPredicted RBP4.15□□□□□ -1.75
CHD9-211ENST00000564600 PUS7LQ9H0K6 701 aaKnown RBP4.15□□□□□ -1.75
CHD9-211ENST00000564600 LANCL2Q9NS86 450 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 KLHL11Q9NVR0 708 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 TRHDEQ9UKU6 1024 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 CLCA2Q9UQC9 943 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 WASHC2AQ641Q2 1341 aa4.15□□□□□ -1.75
CHD9-211ENST00000564600 TCRBV7S2A1N4TA0A589 114 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 GABRDO14764 452 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 B3GALT2O43825 422 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 ZFPL1O95159 310 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 CDK11BP21127 795 aaKnown RBP4.14□□□□□ -1.75
CHD9-211ENST00000564600 EDNRBP24530 442 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 MGAT1P26572 445 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 SLC6A4P31645 630 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 GUCY2FP51841 1108 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 OCA2Q04671 838 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 RESTQ13127 1097 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 TARDBPQ13148 414 aaKnown RBP eCLIP4.14□□□□□ -1.75
CHD9-211ENST00000564600 PCBP2Q15366 365 aaKnown RBP eCLIP4.14□□□□□ -1.75
CHD9-211ENST00000564600 RRP12Q5JTH9 1297 aaKnown RBP4.14□□□□□ -1.75
CHD9-211ENST00000564600 EPHA10Q5JZY3 1008 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 OTUD7BQ6GQQ9 843 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 PLXDC1Q8IUK5 500 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 ARHGEF19Q8IW93 802 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 RHOT2Q8IXI1 618 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 CMTR2Q8IYT2 770 aaKnown RBP4.14□□□□□ -1.75
CHD9-211ENST00000564600 PRPF38AQ8NAV1 312 aaKnown RBP4.14□□□□□ -1.75
CHD9-211ENST00000564600 FAXDC2Q96IV6 333 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 CYP4F11Q9HBI6 524 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 SYBUQ9NX95 663 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 USP25Q9UHP3 1055 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 MCM8Q9UJA3 840 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 LIMCH1Q9UPQ0 1083 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 PCDHA13Q9Y5I0 950 aa4.14□□□□□ -1.75
CHD9-211ENST00000564600 GAGE12BA1L429 117 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 GAGE12HA6NDE8 117 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms