RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 ANKS3Q6ZW76 656 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 TAS1R3Q7RTX0 852 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 KCNK18Q7Z418 384 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 GLYCTKQ8IVS8 523 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 HASPINQ8TF76 798 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 TBC1D32Q96NH3 1257 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 TARS2Q9BW92 718 aaKnown RBP16.44■□□□□ 0.22
SPG7-210ENST00000564409 LARSQ9P2J5 1176 aaKnown RBP16.44■□□□□ 0.22
SPG7-210ENST00000564409 MTRRQ9UBK8 725 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 CACNG4Q9UBN1 327 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 BACE2Q9Y5Z0 518 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 PDCD11Q14690 1871 aaKnown RBP16.44■□□□□ 0.22
SPG7-210ENST00000564409 DOCK6Q96HP0 2047 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 SLC16A4O15374 487 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 XYLBO75191 536 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 ABCD1P33897 745 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 CLCNKBP51801 687 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 SLC12A3P55017 1021 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 TCF15Q12870 199 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 ZRSR1Q15695 479 aaKnown RBP16.43■□□□□ 0.22
SPG7-210ENST00000564409 PPM1LQ5SGD2 360 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 TMEM161BQ8NDZ6 487 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 FEZF2Q8TBJ5 459 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 CALML4Q96GE6 196 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 PNMA5Q96PV4 448 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 CXCL16Q9H2A7 254 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 WNT16Q9UBV4 365 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 ODF2LQ9ULJ1 636 aa16.43■□□□□ 0.22
SPG7-210ENST00000564409 ABLIM1O14639 778 aa16.42■□□□□ 0.22
SPG7-210ENST00000564409 N4BP1O75113 896 aaKnown RBP16.42■□□□□ 0.22
SPG7-210ENST00000564409 CD2BP2O95400 341 aaKnown RBP16.42■□□□□ 0.22
SPG7-210ENST00000564409 PDGFBP01127 241 aaPredicted RBP16.42■□□□□ 0.22
SPG7-210ENST00000564409 PLA2G4BP0C869 781 aa16.42■□□□□ 0.22
SPG7-210ENST00000564409 LAMP2P13473 410 aa16.42■□□□□ 0.22
SPG7-210ENST00000564409 PDCP20941 246 aa16.42■□□□□ 0.22
SPG7-210ENST00000564409 UBA7P41226 1012 aa16.42■□□□□ 0.22
SPG7-210ENST00000564409 NOLC1Q14978 699 aaKnown RBP eCLIP16.42■□□□□ 0.22
SPG7-210ENST00000564409 KYAT1Q16773 422 aa16.42■□□□□ 0.22
SPG7-210ENST00000564409 TMEM119Q4V9L6 283 aa16.42■□□□□ 0.22
SPG7-210ENST00000564409 GLRA4Q5JXX5 417 aa16.42■□□□□ 0.22
SPG7-210ENST00000564409 SNX27Q96L92 541 aa16.42■□□□□ 0.22
SPG7-210ENST00000564409 CNTN3Q9P232 1028 aa16.42■□□□□ 0.22
SPG7-210ENST00000564409 SFI1A8K8P3 1242 aa16.41■□□□□ 0.22
SPG7-210ENST00000564409 SYN3O14994 580 aa16.41■□□□□ 0.22
SPG7-210ENST00000564409 GALR2O43603 387 aaPredicted RBP16.41■□□□□ 0.22
SPG7-210ENST00000564409 C8AP07357 584 aa16.41■□□□□ 0.22
SPG7-210ENST00000564409 MAPTP10636 758 aaKnown RBP16.41■□□□□ 0.22
SPG7-210ENST00000564409 OR1D2P34982 312 aa16.41■□□□□ 0.22
SPG7-210ENST00000564409 LONP1P36776 959 aaKnown RBP16.41■□□□□ 0.22
SPG7-210ENST00000564409 MYADMQ96S97 322 aa16.41■□□□□ 0.22
SPG7-210ENST00000564409 TSPAN18Q96SJ8 248 aa16.41■□□□□ 0.22
SPG7-210ENST00000564409 RTP3Q9BQQ7 232 aa16.41■□□□□ 0.22
SPG7-210ENST00000564409 PLEKHA5Q9HAU0 1116 aa16.41■□□□□ 0.22
SPG7-210ENST00000564409 FBXL21Q9UKT6 434 aa16.41■□□□□ 0.22
SPG7-210ENST00000564409 WDFY4Q6ZS81 3184 aa16.4■□□□□ 0.22
SPG7-210ENST00000564409 ANHXE9PGG2 379 aa16.4■□□□□ 0.22
SPG7-210ENST00000564409 H7C4K7 107 aa16.4■□□□□ 0.22
SPG7-210ENST00000564409 CLDN3O15551 220 aa16.4■□□□□ 0.22
SPG7-210ENST00000564409 SRFP11831 508 aa16.4■□□□□ 0.22
SPG7-210ENST00000564409 FSHRP23945 695 aa16.4■□□□□ 0.22
SPG7-210ENST00000564409 OSTNP61366 133 aa16.4■□□□□ 0.22
SPG7-210ENST00000564409 MCL1Q07820 350 aa16.4■□□□□ 0.22
SPG7-210ENST00000564409 AXDND1Q5T1B0 1012 aaPredicted RBP16.4■□□□□ 0.22
SPG7-210ENST00000564409 CD300LGQ6UXG3 332 aa16.4■□□□□ 0.22
SPG7-210ENST00000564409 SLC44A3Q8N4M1 653 aa16.4■□□□□ 0.22
SPG7-210ENST00000564409 CEP120Q8N960 986 aa16.4■□□□□ 0.22
SPG7-210ENST00000564409 SMOC2Q9H3U7 446 aa16.4■□□□□ 0.22
SPG7-210ENST00000564409 PODXLO00592 558 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 MYBP10242 640 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 NCKAP1LP55160 1127 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 RAD51AP2Q09MP3 1159 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 ARSHQ5FYA8 562 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 SLC8B1Q6J4K2 584 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 GET4Q7L5D6 327 aaPredicted RBP16.39■□□□□ 0.21
SPG7-210ENST00000564409 TMEM105Q8N8V8 129 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 ZNF461Q8TAF7 563 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 ZMAT2Q96NC0 199 aaKnown RBP16.39■□□□□ 0.21
SPG7-210ENST00000564409 ANKFY1Q9P2R3 1169 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 CDH7Q9ULB5 785 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 KCNH3Q9ULD8 1083 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 MAFFQ9ULX9 164 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 NUB1Q9Y5A7 615 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 CDY1Q9Y6F8 540 aa16.39■□□□□ 0.21
SPG7-210ENST00000564409 ADAM12O43184 909 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 CLTAP09496 248 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 AOC1P19801 751 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 TKTP29401 623 aaKnown RBP16.38■□□□□ 0.21
SPG7-210ENST00000564409 SOX4Q06945 474 aaPredicted RBP16.38■□□□□ 0.21
SPG7-210ENST00000564409 CUL4AQ13619 759 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 HTR4Q13639 388 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 SLC10A6Q3KNW5 377 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 MTSS1LQ765P7 747 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 HAUS6Q7Z4H7 955 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 GRASPQ7Z6J2 395 aaPredicted RBP16.38■□□□□ 0.21
SPG7-210ENST00000564409 C3orf58Q8NDZ4 430 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 APPL2Q8NEU8 664 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 SLC7A14Q8TBB6 771 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 ATOH1Q92858 354 aaPredicted RBP16.38■□□□□ 0.21
SPG7-210ENST00000564409 SUSD3Q96L08 255 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 PLIN2Q99541 437 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms