RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PFKMP08237 780 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 TRIM49P0CI25 452 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 TRIM49CP0CI26 452 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 DLATP10515 647 aaKnown RBP13.98□□□□□ -0.17
SPG7-209ENST00000564047 ITGA4P13612 1032 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 PLA2G5P39877 138 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 AP3M2P53677 418 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 WNT7BP56706 349 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 FAM189BP81408 668 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 CNKSR3Q6P9H4 555 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 ECHDC2Q86YB7 292 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 NT5DC4Q86YG4 428 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 WDR49Q8IV35 697 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 LINC01599Q8WXQ3 324 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 FAM122AQ96E09 287 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 SNX27Q96L92 541 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 TSPAN18Q96SJ8 248 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 TTYH1Q9H313 450 aaPredicted RBP13.98□□□□□ -0.17
SPG7-209ENST00000564047 INTS13Q9NVM9 706 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 GIT1Q9Y2X7 761 aa13.98□□□□□ -0.17
SPG7-209ENST00000564047 TMEM265A0A087WTH1 108 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 A0A1W2PQC6 194 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 GTPBP10A4D1E9 387 aaKnown RBP13.97□□□□□ -0.17
SPG7-209ENST00000564047 LACTBL1A8MY62 500 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 RBAK-RBAKDNI3L0D1 243 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 ENPP3O14638 875 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 MEFVO15553 781 aaPredicted RBP13.97□□□□□ -0.17
SPG7-209ENST00000564047 TEX33O43247 280 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 N4BP1O75113 896 aaKnown RBP13.97□□□□□ -0.17
SPG7-209ENST00000564047 EOMESO95936 686 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 TNNI1P19237 187 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 AKAP5P24588 427 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 FMO5P49326 533 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 UBXN1Q04323 297 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 PPP3CAQ08209 521 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 XKR4Q5GH76 650 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 ALKAL1Q6UXT8 129 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 DEFB128Q7Z7B8 93 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 ZNF598Q86UK7 904 aaKnown RBP13.97□□□□□ -0.17
SPG7-209ENST00000564047 RPUSD2Q8IZ73 545 aaKnown RBP13.97□□□□□ -0.17
SPG7-209ENST00000564047 VWCEQ96DN2 955 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 FAM212AQ96EL1 285 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 ERGIC2Q96RQ1 377 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 POP1Q99575 1024 aaKnown RBP13.97□□□□□ -0.17
SPG7-209ENST00000564047 APOL6Q9BWW8 343 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 ELAC1Q9H777 363 aaKnown RBP13.97□□□□□ -0.17
SPG7-209ENST00000564047 TMEM8AQ9HCN3 771 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 UBN1Q9NPG3 1134 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 CNTN3Q9P232 1028 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 PARP2Q9UGN5 583 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 RAPGEFL1Q9UHV5 662 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 DERAQ9Y315 318 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 C2CD2Q9Y426 696 aa13.97□□□□□ -0.17
SPG7-209ENST00000564047 C4BPAP04003 597 aaKnown RBP13.96□□□□□ -0.17
SPG7-209ENST00000564047 PTMAP06454 111 aaKnown RBP13.96□□□□□ -0.17
SPG7-209ENST00000564047 CSF2RAP15509 400 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 ATF7P17544 494 aaPredicted RBP13.96□□□□□ -0.17
SPG7-209ENST00000564047 CDC25BP30305 580 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 PBX1P40424 430 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 GCLMP48507 274 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 MXI1P50539 228 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 CETN1Q12798 172 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 IKBKEQ14164 716 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 DUOXA2Q1HG44 320 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 TCTN1Q2MV58 587 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 CBWD6Q4V339 395 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 CBWD3Q5JTY5 395 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 CBWD5Q5RIA9 395 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 C9orf50Q5SZB4 431 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 KRT39Q6A163 491 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 AGMOQ6ZNB7 445 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 C15orf39Q6ZRI6 1047 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.96□□□□□ -0.17
SPG7-209ENST00000564047 ZNF516Q92618 1163 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 TMEM117Q9H0C3 514 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
SPG7-209ENST00000564047 TMEM161AQ9NX61 479 aa13.96□□□□□ -0.17
SPG7-209ENST00000564047 PTPRJQ12913 1337 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 ABHD14A-ACY1A0A1B0GW23 586 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 TULP1O00294 542 aaPredicted RBP13.95□□□□□ -0.18
SPG7-209ENST00000564047 KCNE1P15382 129 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 MYL7Q01449 175 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 TMEM132DQ14C87 1099 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 ZACNQ401N2 412 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 JADE1Q6IE81 842 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 GBP6Q6ZN66 633 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 SV2AQ7L0J3 742 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 VSTM4Q8IW00 320 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 EFCAB13Q8IY85 973 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 CACTINQ8WUQ7 758 aaKnown RBP13.95□□□□□ -0.18
SPG7-209ENST00000564047 ANKRD36BP1Q96IX9 119 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 MMRN2Q9H8L6 949 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 RSAD1Q9HA92 442 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 IL23AQ9NPF7 189 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.95□□□□□ -0.18
SPG7-209ENST00000564047 COQ4Q9Y3A0 265 aa13.95□□□□□ -0.18
SPG7-209ENST00000564047 SMIM28A0A1B0GU29 152 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.94□□□□□ -0.18
SPG7-209ENST00000564047 GOLGA6L6A8MZA4 724 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms