RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 AKAP5P24588 427 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 AP3M2P53677 418 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 POLR2FP61218 127 aaKnown RBP10.99□□□□□ -0.65
SMG1-208ENST00000563448 ZBED6P86452 979 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 CCZ1BP86790 482 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 CCZ1P86791 482 aaPredicted RBP10.99□□□□□ -0.65
SMG1-208ENST00000563448 GPNMBQ14956 572 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 JADE1Q6IE81 842 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 PHLDB3Q6NSJ2 640 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 TMEM139Q8IV31 216 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 SNX27Q96L92 541 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 APOL6Q9BWW8 343 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 NAA15Q9BXJ9 866 aaKnown RBP10.99□□□□□ -0.65
SMG1-208ENST00000563448 MTMR12Q9C0I1 747 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 NLRC4Q9NPP4 1024 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 ABHD10Q9NUJ1 306 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 FAM105AQ9NUU6 356 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 RAB20Q9NX57 234 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 FBXL5Q9UKA1 691 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 FHOD1Q9Y613 1164 aa10.99□□□□□ -0.65
SMG1-208ENST00000563448 PITPNM1O00562 1244 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 NBNO60934 754 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 RECQL4O94761 1208 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 HLA-DRAP01903 254 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 UCHL3P15374 230 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 CAPN2P17655 700 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 BIRC3Q13489 604 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 DUOXA2Q1HG44 320 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 IQCEQ6IPM2 695 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 ALKAL1Q6UXT8 129 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 TRAPPC11Q7Z392 1133 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 CACNA2D4Q7Z3S7 1137 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 ARHGEF19Q8IW93 802 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 CD302Q8IX05 232 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 TMEM130Q8N3G9 435 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 ELMO3Q96BJ8 720 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 PANX2Q96RD6 677 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 DNAJC7Q99615 494 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 PLEKHA5Q9HAU0 1116 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 ATP11BQ9Y2G3 1177 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 PCDHB2Q9Y5E7 798 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 LTBP2Q14767 1821 aa10.98□□□□□ -0.65
SMG1-208ENST00000563448 FNDC1Q4ZHG4 1894 aaPredicted RBP10.98□□□□□ -0.65
SMG1-208ENST00000563448 LRRC53A6NM62 1247 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 CST3P01034 146 aaPredicted RBP10.97□□□□□ -0.65
SMG1-208ENST00000563448 TMEM191BP0C7N4 346 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 YARSP54577 528 aaKnown RBP10.97□□□□□ -0.65
SMG1-208ENST00000563448 TFAMQ00059 246 aaKnown RBP10.97□□□□□ -0.65
SMG1-208ENST00000563448 LRRC26Q2I0M4 334 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 PDXDC1Q6P996 788 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 OR8K1Q8NGG5 319 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 ANKRD36BP1Q96IX9 119 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 ZMAT2Q96NC0 199 aaKnown RBP10.97□□□□□ -0.65
SMG1-208ENST00000563448 PI4K2AQ9BTU6 479 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 TRAIPQ9BWF2 469 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMG1-208ENST00000563448 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.97□□□□□ -0.65
SMG1-208ENST00000563448 APEX2Q9UBZ4 518 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 PARP2Q9UGN5 583 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 DNAJC12Q9UKB3 198 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 TTC3P53804 2025 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 MEIS3P2A8K0S8 358 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 TNNC2P02585 160 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 FECHP22830 423 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 PIK3CAP42336 1068 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 TMEM132DQ14C87 1099 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 XKR4Q5GH76 650 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 E4F1Q66K89 784 aaPredicted RBP10.97□□□□□ -0.65
SMG1-208ENST00000563448 WDR59Q6PJI9 974 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 RRAGAQ7L523 313 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 NECAB2Q7Z6G3 386 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 MRPL10Q7Z7H8 261 aaKnown RBP10.97□□□□□ -0.65
SMG1-208ENST00000563448 RTN4RL1Q86UN2 441 aaPredicted RBP10.97□□□□□ -0.65
SMG1-208ENST00000563448 NT5DC4Q86YG4 428 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 ZNF397Q8NF99 534 aaPredicted RBP10.97□□□□□ -0.65
SMG1-208ENST00000563448 TATDN2Q93075 761 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 ADAM2Q99965 735 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 IFIH1Q9BYX4 1025 aaKnown RBP10.97□□□□□ -0.65
SMG1-208ENST00000563448 WNT8AQ9H1J5 351 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 HIPK3Q9H422 1215 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 KLK14Q9P0G3 267 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 CNTN3Q9P232 1028 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 C2CD2Q9Y426 696 aa10.97□□□□□ -0.65
SMG1-208ENST00000563448 PTPRSQ13332 1948 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 ZC3H11AO75152 810 aaKnown RBP eCLIP10.96□□□□□ -0.654e-7■■■■■ 41.2
SMG1-208ENST00000563448 PHACTR2O75167 634 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 ITGA4P13612 1032 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 JAM2P57087 298 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 ZBTB6Q15916 424 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 C1orf127Q8N9H9 656 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 CXorf38Q8TB03 319 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 HELQQ8TDG4 1101 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 LINC01599Q8WXQ3 324 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 KAT5Q92993 513 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 LPPQ93052 612 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 KIF12Q96FN5 646 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 SCLYQ96I15 445 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 BAG1Q99933 345 aaPredicted RBP10.96□□□□□ -0.65
SMG1-208ENST00000563448 PPP1R12CQ9BZL4 782 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 GPR88Q9GZN0 384 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms