RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 NOLC1Q14978 699 aaKnown RBP eCLIP6.76□□□□□ -1.33
CNOT1-204ENST00000563130 L1TD1Q5T7N2 865 aaKnown RBP6.76□□□□□ -1.33
CNOT1-204ENST00000563130 COLGALT2Q8IYK4 626 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 GLIS3Q8NEA6 775 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 URGCPQ8TCY9 931 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 HPS3Q969F9 1004 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 MRPL38Q96DV4 380 aaKnown RBP6.76□□□□□ -1.33
CNOT1-204ENST00000563130 TMEM175Q9BSA9 504 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 TCHPQ9BT92 498 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 APOL6Q9BWW8 343 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 LMAN2LQ9H0V9 348 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 TBC1D7Q9P0N9 293 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 DNAJB4Q9UDY4 337 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 PARP2Q9UGN5 583 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 PCDHB12Q9Y5F1 795 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 SPTBN5Q9NRC6 3674 aaKnown RBP6.76□□□□□ -1.33
CNOT1-204ENST00000563130 PRRC2BQ5JSZ5 2229 aaKnown RBP6.76□□□□□ -1.33
CNOT1-204ENST00000563130 TISP43B9A030 160 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 ANKRD63C9JTQ0 380 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 FGF18O76093 207 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 GCNT3O95395 438 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 EFEMP2O95967 443 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 ADRB2P07550 413 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 DNAJB1P25685 340 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 ADSSP30520 456 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 PPM1AP35813 382 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 PBX3P40426 434 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 ALDH7A1P49419 539 aaKnown RBP6.76□□□□□ -1.33
CNOT1-204ENST00000563130 LIG4P49917 911 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 GUCA2AQ02747 115 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 UBE3AQ05086 875 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 FAM160A1Q05DH4 1040 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 DPYDQ12882 1025 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 GRIK3Q13003 919 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 FAM26FQ5R3K3 315 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 ZBTB33Q86T24 672 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 TMEM173Q86WV6 379 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-204ENST00000563130 ZNF507Q8TCN5 953 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 TIGD1Q96MW7 591 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 ZNF558Q96NG5 402 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 SLC6A16Q9GZN6 736 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 IKZF4Q9H2S9 585 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 ALG13Q9NP73 1137 aaKnown RBP6.76□□□□□ -1.33
CNOT1-204ENST00000563130 KLK14Q9P0G3 267 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 ANKFY1Q9P2R3 1169 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 LZTS1Q9Y250 596 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 GDAQ9Y2T3 454 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 GOLGA6L4A6NEF3 574 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 EIF3DO15371 548 aaKnown RBP eCLIP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 ZC3H11AO75152 810 aaKnown RBP eCLIP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 GADD45BO75293 160 aaPredicted RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 PRPF6O94906 941 aaKnown RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 KCNE1P15382 129 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 IGFBP4P22692 258 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 SLC11A1P49279 550 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 POU5F1Q01860 360 aaKnown RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 RNASELQ05823 741 aaKnown RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 BMT2Q1RMZ1 405 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 SLC10A6Q3KNW5 377 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 SPOUT1Q5T280 376 aaKnown RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 SLFN12LQ6IEE8 588 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 RNF19BQ6ZMZ0 732 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 ELOA2Q8IYF1 753 aaPredicted RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 THNSL1Q8IYQ7 743 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 RNF168Q8IYW5 571 aaPredicted RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 BCL7CQ8WUZ0 217 aaPredicted RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 SCFD1Q8WVM8 642 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 POF1BQ8WVV4 589 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 BICD1Q96G01 975 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 IGSF21Q96ID5 467 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 SNX27Q96L92 541 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 ZMAT2Q96NC0 199 aaKnown RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 ACAP3Q96P50 834 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 PPP1R10Q96QC0 940 aaKnown RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 ACCSQ96QU6 501 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 CCDC94Q9BW85 323 aaPredicted RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 TMEM206Q9H813 350 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 TOPORSQ9NS56 1045 aaPredicted RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 SPG21Q9NZD8 308 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 CNTN3Q9P232 1028 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 CPSF3Q9UKF6 684 aaKnown RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 EXOC7Q9UPT5 735 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 SMIM28A0A1B0GU29 152 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 TTC26A0AVF1 554 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 NT5C1B-RDH14C9J2C7 533 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 NRP1O14786 923 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 OGTO15294 1046 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 ALDH2P05091 517 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 THP07101 528 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 CLTAP09496 248 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 TNFSF9P41273 254 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 OSTNP61366 133 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 STK4Q13043 487 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 PSMD2Q13200 908 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 TUSC3Q13454 348 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 KYAT1Q16773 422 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 PTPROQ16827 1216 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 SEZ6Q53EL9 994 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 ZBTB41Q5SVQ8 909 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 KANK3Q6NY19 840 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms