RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 UPP1Q16831 310 aa20.38■□□□□ 0.85
CDH11-206ENST00000562998 KIAA0319Q5VV43 1072 aa20.38■□□□□ 0.85
CDH11-206ENST00000562998 FUT10Q6P4F1 479 aa20.38■□□□□ 0.85
CDH11-206ENST00000562998 GRAMD1CQ8IYS0 662 aa20.38■□□□□ 0.85
CDH11-206ENST00000562998 CEP57L1Q8IYX8 460 aa20.38■□□□□ 0.85
CDH11-206ENST00000562998 AUTS2Q8WXX7 1259 aa20.38■□□□□ 0.85
CDH11-206ENST00000562998 ACCSQ96QU6 501 aa20.38■□□□□ 0.85
CDH11-206ENST00000562998 BLZF1Q9H2G9 400 aa20.38■□□□□ 0.85
CDH11-206ENST00000562998 CXCL8P10145 99 aa20.37■□□□□ 0.85
CDH11-206ENST00000562998 IGFBP6P24592 240 aaPredicted RBP20.37■□□□□ 0.85
CDH11-206ENST00000562998 SYKP43405 635 aa20.37■□□□□ 0.85
CDH11-206ENST00000562998 AFMP43652 599 aa20.37■□□□□ 0.85
CDH11-206ENST00000562998 RBM10P98175 930 aaKnown RBP20.37■□□□□ 0.85
CDH11-206ENST00000562998 POU5F1Q01860 360 aaKnown RBP20.37■□□□□ 0.85
CDH11-206ENST00000562998 DSG1Q02413 1049 aa20.37■□□□□ 0.85
CDH11-206ENST00000562998 UROC1Q96N76 676 aa20.37■□□□□ 0.85
CDH11-206ENST00000562998 MSTO1Q9BUK6 570 aa20.37■□□□□ 0.85
CDH11-206ENST00000562998 SLC38A7Q9NVC3 462 aa20.37■□□□□ 0.85
CDH11-206ENST00000562998 EXOC7Q9UPT5 735 aa20.37■□□□□ 0.85
CDH11-206ENST00000562998 H3BQ06 376 aaPredicted RBP20.36■□□□□ 0.85
CDH11-206ENST00000562998 EIF3DO15371 548 aaKnown RBP eCLIP20.36■□□□□ 0.85
CDH11-206ENST00000562998 CLASP2O75122 1294 aaKnown RBP20.36■□□□□ 0.85
CDH11-206ENST00000562998 MYL1P05976 194 aa20.36■□□□□ 0.85
CDH11-206ENST00000562998 CLCNKBP51801 687 aa20.36■□□□□ 0.85
CDH11-206ENST00000562998 BMS1Q14692 1282 aaKnown RBP20.36■□□□□ 0.85
CDH11-206ENST00000562998 POSTNQ15063 836 aa20.36■□□□□ 0.85
CDH11-206ENST00000562998 FAM26FQ5R3K3 315 aa20.36■□□□□ 0.85
CDH11-206ENST00000562998 CRELD2Q6UXH1 353 aaPredicted RBP20.36■□□□□ 0.85
CDH11-206ENST00000562998 FSIP1Q8NA03 581 aa20.36■□□□□ 0.85
CDH11-206ENST00000562998 ZNF507Q8TCN5 953 aa20.36■□□□□ 0.85
CDH11-206ENST00000562998 TSPAN18Q96SJ8 248 aa20.36■□□□□ 0.85
CDH11-206ENST00000562998 GOLGA2P5Q9HBQ8 144 aa20.36■□□□□ 0.85
CDH11-206ENST00000562998 ANK1P16157 1881 aa20.35■□□□□ 0.85
CDH11-206ENST00000562998 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.35■□□□□ 0.85
CDH11-206ENST00000562998 LACTBL1A8MY62 500 aa20.35■□□□□ 0.85
CDH11-206ENST00000562998 PRPF6O94906 941 aaKnown RBP20.35■□□□□ 0.85
CDH11-206ENST00000562998 MATR3P43243 847 aaKnown RBP eCLIP20.35■□□□□ 0.85
CDH11-206ENST00000562998 DCLRE1AQ6PJP8 1040 aa20.35■□□□□ 0.85
CDH11-206ENST00000562998 C3orf58Q8NDZ4 430 aa20.35■□□□□ 0.85
CDH11-206ENST00000562998 SLC22A17Q8WUG5 538 aa20.35■□□□□ 0.85
CDH11-206ENST00000562998 C18orf25Q96B23 403 aaPredicted RBP20.35■□□□□ 0.85
CDH11-206ENST00000562998 TMEM206Q9H813 350 aa20.35■□□□□ 0.85
CDH11-206ENST00000562998 RXFP1Q9HBX9 757 aa20.35■□□□□ 0.85
CDH11-206ENST00000562998 AGO2Q9UKV8 859 aaKnown RBP20.35■□□□□ 0.85
CDH11-206ENST00000562998 HCFC2Q9Y5Z7 792 aa20.35■□□□□ 0.85
CDH11-206ENST00000562998 SF3B1O75533 1304 aaKnown RBP eCLIP20.34■□□□□ 0.85
CDH11-206ENST00000562998 VWA8A3KMH1 1905 aa20.34■□□□□ 0.85
CDH11-206ENST00000562998 GRXCR2A6NFK2 248 aa20.34■□□□□ 0.85
CDH11-206ENST00000562998 TADA2AO75478 443 aa20.34■□□□□ 0.85
CDH11-206ENST00000562998 CNPP09543 421 aaKnown RBP20.34■□□□□ 0.85
CDH11-206ENST00000562998 GARTP22102 1010 aa20.34■□□□□ 0.85
CDH11-206ENST00000562998 GLUD2P49448 558 aa20.34■□□□□ 0.85
CDH11-206ENST00000562998 ACOT2P49753 483 aa20.34■□□□□ 0.85
CDH11-206ENST00000562998 BMT2Q1RMZ1 405 aa20.34■□□□□ 0.85
CDH11-206ENST00000562998 USP41Q3LFD5 358 aa20.34■□□□□ 0.85
CDH11-206ENST00000562998 KRBA2Q6ZNG9 492 aa20.34■□□□□ 0.85
CDH11-206ENST00000562998 CD302Q8IX05 232 aa20.34■□□□□ 0.85
CDH11-206ENST00000562998 DDX27Q96GQ7 796 aaKnown RBP20.34■□□□□ 0.85
CDH11-206ENST00000562998 KLHL5Q96PQ7 755 aa20.34■□□□□ 0.85
CDH11-206ENST00000562998 COL25A1Q9BXS0 654 aaPredicted RBP20.34■□□□□ 0.85
CDH11-206ENST00000562998 RPF1Q9H9Y2 349 aaKnown RBP20.34■□□□□ 0.85
CDH11-206ENST00000562998 MRPL17Q9NRX2 175 aaKnown RBP20.34■□□□□ 0.85
CDH11-206ENST00000562998 BARX2Q9UMQ3 279 aaPredicted RBP20.34■□□□□ 0.85
CDH11-206ENST00000562998 SSX2IPQ9Y2D8 614 aa20.34■□□□□ 0.85
CDH11-206ENST00000562998 TTC28Q96AY4 2481 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 B3GAT3O94766 335 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 ZNF202O95125 648 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 URODP06132 367 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 CYP3A5P20815 502 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 LRPAP1P30533 357 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 RPL9P32969 192 aaKnown RBP20.33■□□□□ 0.85
CDH11-206ENST00000562998 PUS10Q3MIT2 529 aaKnown RBP20.33■□□□□ 0.85
CDH11-206ENST00000562998 STXBP4Q6ZWJ1 553 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 FMR1NBQ8N0W7 255 aaPredicted RBP20.33■□□□□ 0.85
CDH11-206ENST00000562998 SMRP1Q8NCR6 262 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 ENGASEQ8NFI3 743 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 HASPINQ8TF76 798 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 SCFD1Q8WVM8 642 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 POMGNT1Q8WZA1 660 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 B3GALT6Q96L58 329 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 TUBGCP4Q9UGJ1 667 aa20.33■□□□□ 0.85
CDH11-206ENST00000562998 MUC3AQ02505 3323 aa20.33■□□□□ 0.84
CDH11-206ENST00000562998 UBE4BO95155 1302 aa20.32■□□□□ 0.84
CDH11-206ENST00000562998 TGFB1I1O43294 461 aa20.32■□□□□ 0.84
CDH11-206ENST00000562998 NDUFV1P49821 464 aa20.32■□□□□ 0.84
CDH11-206ENST00000562998 PPP2R3AQ06190 1150 aa20.32■□□□□ 0.84
CDH11-206ENST00000562998 ELAVL2Q12926 359 aaKnown RBP20.32■□□□□ 0.84
CDH11-206ENST00000562998 SNW1Q13573 536 aaKnown RBP20.32■□□□□ 0.84
CDH11-206ENST00000562998 RTP2Q5QGT7 225 aa20.32■□□□□ 0.84
CDH11-206ENST00000562998 ZSWIM2Q8NEG5 633 aa20.32■□□□□ 0.84
CDH11-206ENST00000562998 CBWD1Q9BRT8 395 aa20.32■□□□□ 0.84
CDH11-206ENST00000562998 S1PR5Q9H228 398 aa20.32■□□□□ 0.84
CDH11-206ENST00000562998 ASB7Q9H672 318 aa20.32■□□□□ 0.84
CDH11-206ENST00000562998 FNIP2Q9P278 1114 aa20.32■□□□□ 0.84
CDH11-206ENST00000562998 CD207Q9UJ71 328 aa20.32■□□□□ 0.84
CDH11-206ENST00000562998 DERAQ9Y315 318 aa20.32■□□□□ 0.84
CDH11-206ENST00000562998 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.32■□□□□ 0.84
CDH11-206ENST00000562998 TCF20Q9UGU0 1960 aaKnown RBP20.32■□□□□ 0.84
CDH11-206ENST00000562998 PODXLO00592 558 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 TEX28O15482 410 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms