RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 PGBD4Q96DM1 585 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 MYEOVQ96EZ4 313 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 MED15Q96RN5 788 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 PRRX2Q99811 253 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 C11orf54Q9H0W9 315 aaPredicted RBP3.85□□□□□ -1.79
CHD9-207ENST00000562806 RNPEPQ9H4A4 650 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 KMT5AQ9NQR1 393 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 SIDT1Q9NXL6 827 aaKnown RBP3.85□□□□□ -1.79
CHD9-207ENST00000562806 SRRDQ9UH36 339 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 GRXCR1A8MXD5 290 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 RFPL1O75677 317 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 HAUS5O94927 633 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 ZNF202O95125 648 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 AMY1AP04745 511 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 ITGB1P05556 798 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 C1SP09871 688 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 ZSCAN20P17040 1043 aaPredicted RBP3.84□□□□□ -1.79
CHD9-207ENST00000562806 APOBEC3AP31941 199 aaPredicted RBP3.84□□□□□ -1.79
CHD9-207ENST00000562806 CYP2C19P33261 490 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 ALDH1A3P47895 512 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 RAP2BP61225 183 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 PURAQ00577 322 aaKnown RBP3.84□□□□□ -1.79
CHD9-207ENST00000562806 PIN1Q13526 163 aaPredicted RBP3.84□□□□□ -1.79
CHD9-207ENST00000562806 TTF1Q15361 905 aaPredicted RBP3.84□□□□□ -1.79
CHD9-207ENST00000562806 TIGD2Q4W5G0 525 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 ZNF529Q6P280 563 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 FOXR2Q6PJQ5 311 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 C3orf20Q8ND61 904 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 IL17RDQ8NFM7 739 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 OR2I1PQ8NGU4 316 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 SLC35B2Q8TB61 432 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 NSUN6Q8TEA1 469 aaKnown RBP3.84□□□□□ -1.79
CHD9-207ENST00000562806 NUP133Q8WUM0 1156 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 STON2Q8WXE9 905 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 TMX3Q96JJ7 454 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 CLPTM1LQ96KA5 538 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 KRTAP9-3Q9BYQ3 159 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 TRPM5Q9NZQ8 1165 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 LIMCH1Q9UPQ0 1083 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 REXO2Q9Y3B8 237 aaKnown RBP3.84□□□□□ -1.79
CHD9-207ENST00000562806 NEU2Q9Y3R4 380 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 ACTL7AQ9Y615 435 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 FPGT-TNNI3KV9GXZ4 949 aa3.84□□□□□ -1.79
CHD9-207ENST00000562806 TMEM191CA6NGB0 347 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 RPS6KA4O75676 772 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 ABLIM3O94929 683 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 S100BP04271 92 aaPredicted RBP3.83□□□□□ -1.8
CHD9-207ENST00000562806 POU2F2P09086 479 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 CKBP12277 381 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 PDCP20941 246 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 GCSHP23434 173 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 SMARCA1P28370 1054 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 PCSK1P29120 753 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 FXR1P51114 621 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHD9-207ENST00000562806 MCL1Q07820 350 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 GTF2H3Q13889 308 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 ODF1Q14990 250 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 PTPAQ15257 358 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 ODR4Q5SWX8 454 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 FAM102AQ5T9C2 384 aaPredicted RBP3.83□□□□□ -1.8
CHD9-207ENST00000562806 AGAP9Q5VTM2 703 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 LRRC55Q6ZSA7 311 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 USP45Q70EL2 814 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 MED25Q71SY5 747 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 PRR18Q8N4B5 295 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 IFI44Q8TCB0 444 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 STAG1Q8WVM7 1258 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 HOOK2Q96ED9 719 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 MRGPRX4Q96LA9 322 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 PNKPQ96T60 521 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 PACSIN1Q9BY11 444 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 SIK2Q9H0K1 926 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 WDCPQ9H6R7 721 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 LDAHQ9H6V9 325 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 NRDE2Q9H7Z3 1164 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 RLIMQ9NVW2 624 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 RNF181Q9P0P0 153 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 TCEAL9Q9UHQ7 104 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 CHST2Q9Y4C5 530 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 PCDHA13Q9Y5I0 950 aa3.83□□□□□ -1.8
CHD9-207ENST00000562806 PNPLA7Q6ZV29 1317 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 TMEM200CA6NKL6 621 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 AHRRA9YTQ3 701 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 NPIPB8E9PQR5 432 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 NARSO43776 548 aaKnown RBP3.82□□□□□ -1.8
CHD9-207ENST00000562806 FAM20BO75063 409 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 OFD1O75665 1012 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 ZRANB2O95218 330 aaKnown RBP eCLIP3.82□□□□□ -1.8
CHD9-207ENST00000562806 ABHD16AO95870 558 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 GNAI3P08754 354 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 HSPA6P17066 643 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 FPR1P21462 350 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 EDNRBP24530 442 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 ACVRL1P37023 503 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 CHN2P52757 468 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 RNASE9P60153 205 aaKnown RBP3.82□□□□□ -1.8
CHD9-207ENST00000562806 GNAI1P63096 354 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 SLC25A3Q00325 362 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 TLE1Q04724 770 aa3.82□□□□□ -1.8
CHD9-207ENST00000562806 TARDBPQ13148 414 aaKnown RBP eCLIP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms