RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 NPAS3Q8IXF0 933 aa18.23■□□□□ 0.51
CMTM3-205ENST00000562707 RMDN1Q96DB5 314 aa18.23■□□□□ 0.51
CMTM3-205ENST00000562707 PPP1R10Q96QC0 940 aaKnown RBP18.23■□□□□ 0.51
CMTM3-205ENST00000562707 NELL2Q99435 816 aa18.23■□□□□ 0.51
CMTM3-205ENST00000562707 KIFC3Q9BVG8 833 aa18.23■□□□□ 0.51
CMTM3-205ENST00000562707 POLD4Q9HCU8 107 aa18.23■□□□□ 0.51
CMTM3-205ENST00000562707 FBXO4Q9UKT5 387 aa18.23■□□□□ 0.51
CMTM3-205ENST00000562707 ARID2Q68CP9 1835 aa18.23■□□□□ 0.51
CMTM3-205ENST00000562707 VPS13AQ96RL7 3174 aa18.22■□□□□ 0.51
CMTM3-205ENST00000562707 NCAM2O15394 837 aa18.22■□□□□ 0.51
CMTM3-205ENST00000562707 EDN1P05305 212 aa18.22■□□□□ 0.51
CMTM3-205ENST00000562707 TKTP29401 623 aaKnown RBP18.22■□□□□ 0.51
CMTM3-205ENST00000562707 UPP1Q16831 310 aa18.22■□□□□ 0.51
CMTM3-205ENST00000562707 ZBTB41Q5SVQ8 909 aa18.22■□□□□ 0.51
CMTM3-205ENST00000562707 DGLUCYQ7Z3D6 616 aa18.22■□□□□ 0.51
CMTM3-205ENST00000562707 MAML2Q8IZL2 1156 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-205ENST00000562707 ING5Q8WYH8 240 aa18.22■□□□□ 0.51
CMTM3-205ENST00000562707 MCRS1Q96EZ8 462 aa18.22■□□□□ 0.51
CMTM3-205ENST00000562707 DDX27Q96GQ7 796 aaKnown RBP18.22■□□□□ 0.51
CMTM3-205ENST00000562707 CCDC94Q9BW85 323 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-205ENST00000562707 BHMT2Q9H2M3 363 aa18.22■□□□□ 0.51
CMTM3-205ENST00000562707 TOPORSQ9NS56 1045 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-205ENST00000562707 GDE1Q9NZC3 331 aa18.22■□□□□ 0.51
CMTM3-205ENST00000562707 TNFSF13BQ9Y275 285 aa18.22■□□□□ 0.51
CMTM3-205ENST00000562707 DMDP11532 3685 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 SMIM28A0A1B0GU29 152 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 I3L4J1 428 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 PRRG1O14668 218 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 ECI2O75521 394 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 LRG1P02750 347 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 RHOP08100 348 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 PTPN2P17706 415 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 IGFBP6P24592 240 aaPredicted RBP18.21■□□□□ 0.51
CMTM3-205ENST00000562707 BRCC3P46736 316 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 C8orf76Q96K31 380 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 GOLGA2P5Q9HBQ8 144 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 LTB4R2Q9NPC1 389 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 SLC38A7Q9NVC3 462 aa18.21■□□□□ 0.51
CMTM3-205ENST00000562707 MTF2Q9Y483 593 aaPredicted RBP18.21■□□□□ 0.51
CMTM3-205ENST00000562707 TDRD15B5MCY1 1934 aaKnown RBP18.21■□□□□ 0.51
CMTM3-205ENST00000562707 SPTBN4Q9H254 2564 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 CCDC169A6NNP5 214 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 EIF5BO60841 1220 aaKnown RBP18.2■□□□□ 0.5
CMTM3-205ENST00000562707 CD72P21854 359 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 GRM5P41594 1212 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 CSTF1Q05048 431 aaKnown RBP18.2■□□□□ 0.5
CMTM3-205ENST00000562707 GNL2Q13823 731 aaKnown RBP18.2■□□□□ 0.5
CMTM3-205ENST00000562707 PUM1Q14671 1186 aaKnown RBP eCLIP18.2■□□□□ 0.5
CMTM3-205ENST00000562707 TTC38Q5R3I4 469 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 CD300LGQ6UXG3 332 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 DCLK2Q8N568 766 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 SUMF1Q8NBK3 374 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 ZNF461Q8TAF7 563 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 ATRIPQ8WXE1 791 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 FOXP1Q9H334 677 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-205ENST00000562707 AVENQ9NQS1 362 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-205ENST00000562707 LRWD1Q9UFC0 647 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 KIAA1024Q9UPX6 916 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 MRPS17Q9Y2R5 130 aaKnown RBP18.2■□□□□ 0.5
CMTM3-205ENST00000562707 STK24Q9Y6E0 443 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 GVINP1Q7Z2Y8 2422 aa18.2■□□□□ 0.5
CMTM3-205ENST00000562707 H7C4K7 107 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 SPTLC1O15269 473 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 FXR2P51116 673 aaKnown RBP eCLIP18.19■□□□□ 0.5
CMTM3-205ENST00000562707 ARPP19P56211 112 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 PEX3P56589 373 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 OSTNP61366 133 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 ROR1Q01973 937 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 ZNF568Q3ZCX4 644 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 SLC8B1Q6J4K2 584 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 ZNF852Q6ZMS4 543 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 TPRG1Q6ZUI0 275 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 C3orf58Q8NDZ4 430 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 TCHPQ9BT92 498 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 CDT1Q9H211 546 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 NCDNQ9UBB6 729 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 NOL7Q9UMY1 257 aaKnown RBP18.19■□□□□ 0.5
CMTM3-205ENST00000562707 NUB1Q9Y5A7 615 aa18.19■□□□□ 0.5
CMTM3-205ENST00000562707 ARHGEF37A1IGU5 675 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 PODXLO00592 558 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 ZNF197O14709 1029 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 ABLIM3O94929 683 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 PDIA5Q14554 519 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 ECM1Q16610 540 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 SLC5A9Q2M3M2 681 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 XKR4Q5GH76 650 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 VARS2Q5ST30 1063 aaKnown RBP18.18■□□□□ 0.5
CMTM3-205ENST00000562707 CEP120Q8N960 986 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 ELSPBP1Q96BH3 223 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 ACAP3Q96P50 834 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 ACO2Q99798 780 aaKnown RBP18.18■□□□□ 0.5
CMTM3-205ENST00000562707 CORO1BQ9BR76 489 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 MRPL4Q9BYD3 311 aaKnown RBP18.18■□□□□ 0.5
CMTM3-205ENST00000562707 RAB34Q9BZG1 259 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 PLA2G2FQ9BZM2 168 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 TMEM134Q9H6X4 195 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 CYP4F11Q9HBI6 524 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 DDX19AQ9NUU7 478 aaKnown RBP18.18■□□□□ 0.5
CMTM3-205ENST00000562707 DNM3Q9UQ16 869 aa18.18■□□□□ 0.5
CMTM3-205ENST00000562707 PCDHGA2Q9Y5H1 932 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms