RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 COL6A3P12111 3177 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 NLRC5Q86WI3 1866 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 A0A087WZ62 844 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 A0A0A0MRY4 1105 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 IGKV6-21A0A0C4DH24 114 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 KRBA1A5PL33 1030 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 VWA3AA6NCI4 1184 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 RFXAPO00287 272 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 STX6O43752 255 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 DKC1O60832 514 aaKnown RBP eCLIP6.45□□□□□ -1.38
CDH13-206ENST00000562601 AMHP03971 560 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 HSP90AA1P07900 732 aaKnown RBP6.45□□□□□ -1.38
CDH13-206ENST00000562601 SRGAP2CP0DJJ0 459 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 PDCP20941 246 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 GATMP50440 423 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 DNM2P50570 870 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 GPC3P51654 580 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 CRYBB1P53674 252 aaPredicted RBP6.45□□□□□ -1.38
CDH13-206ENST00000562601 RESTQ13127 1097 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 ORC2Q13416 577 aaPredicted RBP6.45□□□□□ -1.38
CDH13-206ENST00000562601 EMC2Q15006 297 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 RAB30Q15771 203 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 PLA2G4EQ3MJ16 856 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 FOXD4L6Q3SYB3 417 aaPredicted RBP6.45□□□□□ -1.38
CDH13-206ENST00000562601 RILPL1Q5EBL4 403 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 CEP135Q66GS9 1140 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 FOXD4L3Q6VB84 417 aaPredicted RBP6.45□□□□□ -1.38
CDH13-206ENST00000562601 DTHD1Q6ZMT9 781 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 FAM228AQ86W67 206 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 MAP4K3Q8IVH8 894 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 DMRTC2Q8IXT2 367 aaPredicted RBP6.45□□□□□ -1.38
CDH13-206ENST00000562601 CEP120Q8N960 986 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 ERMNQ8TAM6 284 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 PHOSPHO2Q8TCD6 241 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 PRPF31Q8WWY3 499 aaKnown RBP6.45□□□□□ -1.38
CDH13-206ENST00000562601 MYLIPQ8WY64 445 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 APBB2Q92870 758 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 DMRTB1Q96MA1 342 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 NLRP4Q96MN2 994 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 CCDC43Q96MW1 224 aaKnown RBP6.45□□□□□ -1.38
CDH13-206ENST00000562601 FAM129BQ96TA1 746 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 CDX2Q99626 313 aaPredicted RBP6.45□□□□□ -1.38
CDH13-206ENST00000562601 FDXACB1Q9BRP7 624 aaPredicted RBP6.45□□□□□ -1.38
CDH13-206ENST00000562601 POLR3CQ9BUI4 534 aaPredicted RBP6.45□□□□□ -1.38
CDH13-206ENST00000562601 CHRDQ9H2X0 955 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 PRDM12Q9H4Q4 367 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 SLC28A3Q9HAS3 691 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 ERVK-5Q9HDB9 667 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 MTUS1Q9ULD2 1270 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 MTMR6Q9Y217 621 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 KDM3AQ9Y4C1 1321 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 EYSQ5T1H1 3165 aa6.45□□□□□ -1.38
CDH13-206ENST00000562601 KIAA1671Q9BY89 1806 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 TTC3P53804 2025 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 DENND3A2RUS2 1198 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 EPOPA6NHQ4 379 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 E9PMD0 336 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 USO1O60763 962 aaKnown RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 EFCAB14O75071 495 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 LYPLA2O95372 231 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 GJB5O95377 273 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 RPLP2P05387 115 aaKnown RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 EIF4BP23588 611 aaKnown RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 RPA1P27694 616 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 MARCKSP29966 332 aaPredicted RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 RARRES1P49788 294 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 ATP2C1P98194 919 aaPredicted RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 ATP11AP98196 1134 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 TAP1Q03518 808 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 GRIN1Q05586 938 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 LAMTOR4Q0VGL1 99 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 PDIA5Q14554 519 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 SF3A1Q15459 793 aaKnown RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 LONRF3Q496Y0 759 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 PAN2Q504Q3 1202 aaKnown RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 SPECC1Q5M775 1068 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 FAM102BQ5T8I3 360 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 BRAPQ7Z569 592 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 FMR1NBQ8N0W7 255 aaPredicted RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 IGSF22Q8N9C0 903 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 NEK9Q8TD19 979 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 ASAP3Q8TDY4 903 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 SLC7A3Q8WY07 619 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 ARNTL2Q8WYA1 636 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 TOP1MTQ969P6 601 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 RAD9AQ99638 391 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 ADAM2Q99965 735 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 MMTAG2Q9BU76 263 aaKnown RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 RBCK1Q9BYM8 510 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 GCOM2Q9BZD3 368 aaPredicted RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 RASSF4Q9H2L5 321 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 DHX33Q9H6R0 707 aaKnown RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 ATP6V0A4Q9HBG4 840 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 TUFT1Q9NNX1 390 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 GPRC5CQ9NQ84 441 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 XPNPEP1Q9NQW7 623 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 ANKEF1Q9NU02 776 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 DDX19AQ9NUU7 478 aaKnown RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 FOXD3Q9UJU5 478 aaPredicted RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 DCTN4Q9UJW0 460 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms