RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 TKFCQ3LXA3 575 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 SYCP2LQ5T4T6 812 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 KHDRBS2Q5VWX1 349 aaKnown RBP11.84□□□□□ -0.51
RPAP1-204ENST00000562303 PAWRQ96IZ0 340 aaKnown RBP11.84□□□□□ -0.51
RPAP1-204ENST00000562303 ELMO2Q96JJ3 720 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 SPATA16Q9BXB7 569 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 FAM32AQ9Y421 112 aaKnown RBP11.84□□□□□ -0.51
RPAP1-204ENST00000562303 KDM5CP41229 1560 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 C19orf81C9J6K1 198 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 HDAC4P56524 1084 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 ABCE1P61221 599 aaKnown RBP11.84□□□□□ -0.51
RPAP1-204ENST00000562303 TOB2Q14106 344 aaPredicted RBP11.84□□□□□ -0.51
RPAP1-204ENST00000562303 NFIXQ14938 502 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 ANKMY2Q8IV38 441 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 OSBPL9Q96SU4 736 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 OLFML3Q9NRN5 406 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 ARHGEF38Q9NXL2 777 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 AURKCQ9UQB9 309 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 PEG3Q9GZU2 1588 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 PFASO15067 1338 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 ANO9A1A5B4 782 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 CCDC78A2IDD5 438 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 FAM187AA6NFU0 413 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 ACOT2P49753 483 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 GRIN1Q05586 938 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 NEDD1Q8NHV4 660 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 DNAJC7Q99615 494 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 KIF2CQ99661 725 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 PCDHB7Q9Y5E2 793 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 CLASP1Q7Z460 1538 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 NPHP3-ACAD11A0A0J9YXS1 232 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 GRID2IPA4D2P6 1211 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 EEF2KO00418 725 aaKnown RBP11.84□□□□□ -0.51
RPAP1-204ENST00000562303 NPM3O75607 178 aaKnown RBP11.84□□□□□ -0.51
RPAP1-204ENST00000562303 SCP2P22307 547 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 KRT17Q04695 432 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 TWF1Q12792 350 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 ARHGAP15Q53QZ3 475 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 CCDC157Q569K6 752 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 TMCO5AQ8N6Q1 288 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 ZNF280CQ8ND82 737 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 SEPT1Q8WYJ6 367 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 SLC38A7Q9NVC3 462 aa11.84□□□□□ -0.51
RPAP1-204ENST00000562303 DGAT1O75907 488 aa11.83□□□□□ -0.51
RPAP1-204ENST00000562303 PDGFRAP16234 1089 aa11.83□□□□□ -0.51
RPAP1-204ENST00000562303 PCSK7Q16549 785 aa11.83□□□□□ -0.51
RPAP1-204ENST00000562303 HIF1AQ16665 826 aa11.83□□□□□ -0.51
RPAP1-204ENST00000562303 GSPT2Q8IYD1 628 aaKnown RBP11.83□□□□□ -0.51
RPAP1-204ENST00000562303 GUF1Q8N442 669 aaKnown RBP11.83□□□□□ -0.51
RPAP1-204ENST00000562303 TSPAN17Q96FV3 270 aa11.83□□□□□ -0.51
RPAP1-204ENST00000562303 GJD4Q96KN9 370 aaPredicted RBP11.83□□□□□ -0.51
RPAP1-204ENST00000562303 ZC4H2Q9NQZ6 224 aa11.83□□□□□ -0.51
RPAP1-204ENST00000562303 ZSCAN32Q9NX65 697 aa11.83□□□□□ -0.51
RPAP1-204ENST00000562303 CFAP74Q9C0B2 1584 aa11.83□□□□□ -0.51
RPAP1-204ENST00000562303 CD4P01730 458 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 TFRCP02786 760 aaKnown RBP11.83□□□□□ -0.52
RPAP1-204ENST00000562303 ALDH1A3P47895 512 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 TRADDQ15628 312 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 FRMD5Q7Z6J6 570 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 HS6ST3Q8IZP7 471 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 RFFLQ8WZ73 363 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 TIPINQ9BVW5 301 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 HSPBP1Q9NZL4 362 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 ARHGAP26Q9UNA1 814 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 WDR19Q8NEZ3 1342 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 ARHGEF9O43307 516 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 CCDC22O60826 627 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 RTN2O75298 545 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 IGKV5-2P06315 115 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 CDC27P30260 824 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 R3HDM1Q15032 1099 aaKnown RBP11.83□□□□□ -0.52
RPAP1-204ENST00000562303 LRRC14Q15048 493 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 ANO5Q75V66 913 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 OOSP2Q86WS3 158 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 LAMB3Q13751 1172 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 C6orf10Q5SRN2 563 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 PTPRN2Q92932 1015 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 CACNA2D2Q9NY47 1150 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 CD274Q9NZQ7 290 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 MAGEB2O15479 319 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 SLC1A1P43005 524 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 PPP2R2AP63151 447 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 PTRHD1Q6GMV3 140 aaKnown RBP11.83□□□□□ -0.52
RPAP1-204ENST00000562303 MB21D2Q8IYB1 491 aaPredicted RBP11.83□□□□□ -0.52
RPAP1-204ENST00000562303 STAG2Q8N3U4 1231 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 FAM84BQ96KN1 310 aaPredicted RBP11.83□□□□□ -0.52
RPAP1-204ENST00000562303 PSD3Q9NYI0 1048 aa11.83□□□□□ -0.52
RPAP1-204ENST00000562303 ESYT3A0FGR9 886 aa11.82□□□□□ -0.52
RPAP1-204ENST00000562303 SKOR1P84550 965 aa11.82□□□□□ -0.52
RPAP1-204ENST00000562303 CCDC15Q0P6D6 951 aa11.82□□□□□ -0.52
RPAP1-204ENST00000562303 ANGEL2Q5VTE6 544 aaKnown RBP11.82□□□□□ -0.52
RPAP1-204ENST00000562303 ALG13Q9NP73 1137 aaKnown RBP11.82□□□□□ -0.52
RPAP1-204ENST00000562303 HPS4Q9NQG7 708 aa11.82□□□□□ -0.52
RPAP1-204ENST00000562303 CFAP99D6REC4 459 aa11.82□□□□□ -0.52
RPAP1-204ENST00000562303 LRG1P02750 347 aa11.82□□□□□ -0.52
RPAP1-204ENST00000562303 EPB42P16452 691 aa11.82□□□□□ -0.52
RPAP1-204ENST00000562303 CENPAP49450 140 aa11.82□□□□□ -0.52
RPAP1-204ENST00000562303 SCARF1Q14162 830 aa11.82□□□□□ -0.52
RPAP1-204ENST00000562303 SV2CQ496J9 727 aa11.82□□□□□ -0.52
RPAP1-204ENST00000562303 TRIM48Q8IWZ4 208 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms