RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TRPC6Q9Y210 931 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 TTLL13PA6NNM8 815 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 RNF40O75150 1001 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 TOM1L1O75674 476 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 CALCAP01258 141 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 TXNP10599 105 aaKnown RBP10.52□□□□□ -0.73
SMG1-205ENST00000561947 COMTP21964 271 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 SLC26A2P50443 739 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 BPIFB4P59827 614 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 CUL1Q13616 776 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 CUL2Q13617 745 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 TTLL4Q14679 1199 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 SEZ6Q53EL9 994 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 EAPPQ56P03 285 aaPredicted RBP10.52□□□□□ -0.73
SMG1-205ENST00000561947 LRRC71Q8N4P6 559 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 OR5B17Q8NGF7 314 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 CCDC26Q8TAB7 109 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 WHAMMQ8TF30 809 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 GTF3C2Q8WUA4 911 aaPredicted RBP10.52□□□□□ -0.73
SMG1-205ENST00000561947 JPH2Q9BR39 696 aaPredicted RBP10.52□□□□□ -0.73
SMG1-205ENST00000561947 C2orf40Q9H1Z8 148 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 SMARCAD1Q9H4L7 1026 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 TAF1DQ9H5J8 278 aaPredicted RBP10.52□□□□□ -0.73
SMG1-205ENST00000561947 APOBEC3GQ9HC16 384 aaKnown RBP10.52□□□□□ -0.73
SMG1-205ENST00000561947 PSD3Q9NYI0 1048 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 PNMA3Q9UL41 463 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 PCDHB2Q9Y5E7 798 aa10.52□□□□□ -0.73
SMG1-205ENST00000561947 ASB14A6NK59 587 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 FAM189A1O60320 539 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 PHACTR2O75167 634 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 PRKCBP05771 671 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 CLTAP09496 248 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 FAM153BP0C7A2 387 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 SRGAP2CP0DJJ0 459 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 UNGP13051 313 aaPredicted RBP10.51□□□□□ -0.73
SMG1-205ENST00000561947 ACO1P21399 889 aaKnown RBP10.51□□□□□ -0.73
SMG1-205ENST00000561947 GRM1Q13255 1194 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 ZNF211Q13398 564 aaPredicted RBP10.51□□□□□ -0.73
SMG1-205ENST00000561947 TRADDQ15628 312 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 FAM153CQ494X1 144 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 ALS2CLQ60I27 953 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 MREGQ8N565 214 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 RNF149Q8NC42 400 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 RIN2Q8WYP3 895 aaPredicted RBP10.51□□□□□ -0.73
SMG1-205ENST00000561947 KRT35Q92764 455 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 ACO2Q99798 780 aaKnown RBP10.51□□□□□ -0.73
SMG1-205ENST00000561947 WNT8AQ9H1J5 351 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 EFCC1Q9HA90 598 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 CNOT8Q9UFF9 292 aaKnown RBP10.51□□□□□ -0.73
SMG1-205ENST00000561947 FAM153AQ9UHL3 310 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 CYP2C8P10632 490 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 TBXAS1P24557 533 aaPredicted RBP10.51□□□□□ -0.73
SMG1-205ENST00000561947 AP3M2P53677 418 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 NOP14P78316 857 aaKnown RBP10.51□□□□□ -0.73
SMG1-205ENST00000561947 PPP2R5EQ16537 467 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 MAPK6Q16659 721 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 MAATS1Q7Z4T9 603 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 ZBTB33Q86T24 672 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 CD101Q93033 1021 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 SLC10A4Q96EP9 437 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 PDGFCQ9NRA1 345 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 AMACRQ9UHK6 382 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 ZSWIM8A7E2V4 1837 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 GOLGA6L10A0A0M3HER8 536 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 ABLIM1O14639 778 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 HBP1O60381 514 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 HSF2BPO75031 334 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 TNFSF9P41273 254 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 MARCKSL1P49006 195 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 PEX5P50542 639 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 PTENP60484 403 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 POU5F1Q01860 360 aaKnown RBP10.51□□□□□ -0.73
SMG1-205ENST00000561947 TMEM63BQ5T3F8 832 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 NAA35Q5VZE5 725 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 ARMCX2Q7L311 632 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 WDR49Q8IV35 697 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 BTBD6Q96KE9 485 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 TCHPQ9BT92 498 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 AVENQ9NQS1 362 aaPredicted RBP10.51□□□□□ -0.73
SMG1-205ENST00000561947 NR2E1Q9Y466 385 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 PCDHB4Q9Y5E5 795 aa10.51□□□□□ -0.73
SMG1-205ENST00000561947 ANK1P16157 1881 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 EVPLQ92817 2033 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 GLTPD2A6NH11 291 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 OGTO15294 1046 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 CYP1A1P04798 512 aaPredicted RBP10.5□□□□□ -0.73
SMG1-205ENST00000561947 HSPA6P17066 643 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 CTNNA2P26232 953 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 ECHS1P30084 290 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 GUCY2FP51841 1108 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 MCL1Q07820 350 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 NCOA4Q13772 614 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 TFDP1Q14186 410 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 RHPN2Q8IUC4 686 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 MCOLN2Q8IZK6 566 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 GPRC5AQ8NFJ5 357 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 TRAPPC12Q8WVT3 735 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 TRIM11Q96F44 468 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 SH3GL2Q99962 352 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 FAM204AQ9H8W3 233 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms