RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 RECKO95980 971 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 GJB1P08034 283 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 IQCF3P0C7M6 154 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 ZNF286BP0CG31 522 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 BMP1P13497 986 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 KRT13P13646 458 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 GTF2H1P32780 548 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 CYLC1P35663 651 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 GCLMP48507 274 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 KIF11P52732 1056 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 EFNA5P52803 228 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 NLRP11P59045 1033 aaKnown RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 PTENP60484 403 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 MYL7Q01449 175 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 POU5F1BQ06416 359 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 MXD4Q14582 209 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 KIF22Q14807 665 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 PSMD6Q15008 389 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 DNTTIP2Q5QJE6 756 aaKnown RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 ZBTB41Q5SVQ8 909 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 PRPF38BQ5VTL8 546 aaKnown RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 ZPBP2Q6X784 338 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 CACNA2D4Q7Z3S7 1137 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 ZNF571Q7Z3V5 609 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 TRIM46Q7Z4K8 759 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 ARHGEF19Q8IW93 802 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 GPD1LQ8N335 351 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 TRPV1Q8NER1 839 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 KIF18AQ8NI77 898 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 DEPTORQ8TB45 409 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 ZNF296Q8WUU4 475 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 KAT2BQ92831 832 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 ACO2Q99798 780 aaKnown RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 JPH2Q9BR39 696 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 TARS2Q9BW92 718 aaKnown RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 NFKBIZQ9BYH8 718 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 STK33Q9BYT3 514 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 MINDY3Q9H8M7 445 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 TOPORSQ9NS56 1045 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 SUCLA2Q9P2R7 463 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 TRIM10Q9UDY6 481 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 TFR2Q9UP52 801 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 PTPRJQ12913 1337 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 F8VZ95 297 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 H3BRB1 525 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 HAS3O00219 553 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 TNPO2O14787 897 aaKnown RBP7.07□□□□□ -1.28
CAPN3-210ENST00000561817 HNRNPDLO14979 420 aaKnown RBP7.07□□□□□ -1.28
CAPN3-210ENST00000561817 MAGEB2O15479 319 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 ASAP2O43150 1006 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 PEX14O75381 377 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 F2P00734 622 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 C4BPAP04003 597 aaKnown RBP7.07□□□□□ -1.28
CAPN3-210ENST00000561817 KLRC1P26715 233 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 ANXA13P27216 316 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 HOXC8P31273 242 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 CYP2C19P33261 490 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 RGS2P41220 211 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 LIG4P49917 911 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 GPC3P51654 580 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 CLCN3P51790 818 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 VAV2P52735 878 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 GNG11P61952 73 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 IGBP1P78318 339 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 NKX3-2P78367 333 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 KRT83P78385 493 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 ADAM17P78536 824 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 CYP27A1Q02318 531 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 SP3Q02447 781 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 TNFAIP2Q03169 654 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 PTK2Q05397 1052 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 MBTD1Q05BQ5 628 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 MCL1Q07820 350 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 RAPGEF1Q13905 1077 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 DRAP1Q14919 205 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-210ENST00000561817 ASIC2Q16515 512 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 FAM187BQ17R55 369 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 TMEM259Q4ZIN3 620 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 EGFLAMQ63HQ2 1017 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 SLFN12LQ6IEE8 588 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 EFCAB12Q6NXP0 572 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 MTHFD1LQ6UB35 978 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 SV2AQ7L0J3 742 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 NME8Q8N427 588 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 OR6J1Q8NGC5 347 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 SLC30A5Q8TAD4 765 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 FAM174AQ8TBP5 190 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 HELQQ8TDG4 1101 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 SOCS4Q8WXH5 440 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 POMGNT1Q8WZA1 660 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 ERO1AQ96HE7 468 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 FAM84AQ96KN4 292 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 CCDC42Q96M95 316 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 KREMEN1Q96MU8 473 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 POP1Q99575 1024 aaKnown RBP7.07□□□□□ -1.28
CAPN3-210ENST00000561817 APBA2Q99767 749 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 FAM213AQ9BRX8 229 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 ARHGAP39Q9C0H5 1083 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 C2orf40Q9H1Z8 148 aa7.07□□□□□ -1.28
CAPN3-210ENST00000561817 HAUS4Q9H6D7 363 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms