RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SLFN11Q7Z7L1 901 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 NT5DC3Q86UY8 548 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 DTX3LQ8TDB6 740 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 DQX1Q8TE96 717 aaKnown RBP19.8■□□□□ 0.76
RAB40C-206ENST00000561781 CTNNBL1Q8WYA6 563 aaPredicted RBP19.8■□□□□ 0.76
RAB40C-206ENST00000561781 GPKOWQ92917 476 aaPredicted RBP eCLIP19.8■□□□□ 0.76
RAB40C-206ENST00000561781 ECSITQ9BQ95 431 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 ZNF180Q9UJW8 692 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 FAM196BA6NMK8 535 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 A8MXQ7 604 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 STRNO43815 780 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 ZWINTO95229 277 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 CDK4P11802 303 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 GALK1P51570 392 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 MOGSQ13724 837 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 RASGRF1Q13972 1273 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 ALDH16A1Q8IZ83 802 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 MIPEPQ99797 713 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 TUBB6Q9BUF5 446 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 KANSL2Q9H9L4 492 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 CLIC5Q9NZA1 410 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 PCDHA4Q9UN74 947 aa19.8■□□□□ 0.76
RAB40C-206ENST00000561781 CCDC88AQ3V6T2 1871 aa19.79■□□□□ 0.76
RAB40C-206ENST00000561781 HDAC4P56524 1084 aa19.79■□□□□ 0.76
RAB40C-206ENST00000561781 CLUL1Q15846 466 aa19.79■□□□□ 0.76
RAB40C-206ENST00000561781 JAMLQ86YT9 394 aa19.79■□□□□ 0.76
RAB40C-206ENST00000561781 LARGE2Q8N3Y3 721 aa19.79■□□□□ 0.76
RAB40C-206ENST00000561781 HES6Q96HZ4 224 aa19.79■□□□□ 0.76
RAB40C-206ENST00000561781 BTBD10Q9BSF8 475 aa19.79■□□□□ 0.76
RAB40C-206ENST00000561781 POLR3CQ9BUI4 534 aaPredicted RBP19.79■□□□□ 0.76
RAB40C-206ENST00000561781 ERVK-5Q9HDB9 667 aa19.79■□□□□ 0.76
RAB40C-206ENST00000561781 NAGPAQ9UK23 515 aa19.79■□□□□ 0.76
RAB40C-206ENST00000561781 COL4A3BPQ9Y5P4 624 aa19.79■□□□□ 0.76
RAB40C-206ENST00000561781 MAGEB2O15479 319 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 ATP2B4P23634 1241 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 CRABP2P29373 138 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 ACADVLP49748 655 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 EMP3P54852 163 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 DYMQ7RTS9 669 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 GLIS3Q8NEA6 775 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 GAB3Q8WWW8 586 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 DNAJC1Q96KC8 554 aaKnown RBP19.78■□□□□ 0.76
RAB40C-206ENST00000561781 FAM84BQ96KN1 310 aaPredicted RBP19.78■□□□□ 0.76
RAB40C-206ENST00000561781 RTFDC1Q9BY42 306 aaPredicted RBP19.78■□□□□ 0.76
RAB40C-206ENST00000561781 GEMIN4P57678 1058 aaKnown RBP19.78■□□□□ 0.76
RAB40C-206ENST00000561781 MAPK7Q13164 816 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 LRRC41Q15345 812 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 TAF1BQ53T94 588 aaPredicted RBP19.78■□□□□ 0.76
RAB40C-206ENST00000561781 ALKBH5Q6P6C2 394 aaKnown RBP19.78■□□□□ 0.76
RAB40C-206ENST00000561781 TRMT10CQ7L0Y3 403 aaKnown RBP19.78■□□□□ 0.76
RAB40C-206ENST00000561781 PHLDB2Q86SQ0 1253 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 DEPTORQ8TB45 409 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 FNDC8Q8TC99 324 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 AK8Q96MA6 479 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 FNBP1Q96RU3 617 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 MXD3Q9BW11 206 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 GRHL1Q9NZI5 618 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 ZFP69BQ9UJL9 534 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 CROTQ9UKG9 612 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 DOCK2Q92608 1830 aa19.78■□□□□ 0.76
RAB40C-206ENST00000561781 PYGMP11217 842 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 MPP2Q14168 576 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 LONRF1Q17RB8 773 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 SLC45A4Q5BKX6 768 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 THOC7Q6I9Y2 204 aaKnown RBP19.77■□□□□ 0.76
RAB40C-206ENST00000561781 C3orf62Q6ZUJ4 267 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 ZC3H12CQ9C0D7 883 aaKnown RBP19.77■□□□□ 0.76
RAB40C-206ENST00000561781 RNF181Q9P0P0 153 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 PHTF1Q9UMS5 762 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 MYMKA6NI61 221 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 YDJCA8MPS7 323 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 LAD1O00515 517 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 RNASEH1O60930 286 aaKnown RBP19.77■□□□□ 0.76
RAB40C-206ENST00000561781 UBE4AQ14139 1066 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 SPIDRQ14159 915 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 GRM2Q14416 872 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 PDCD4Q53EL6 469 aaKnown RBP19.77■□□□□ 0.76
RAB40C-206ENST00000561781 NANOGNBQ7Z5D8 188 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 IRF2BP2Q7Z5L9 587 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 SATL1Q86VE3 508 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 PIP4K2CQ8TBX8 421 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 MCUR1Q96AQ8 359 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 TSG101Q99816 390 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 GPCPD1Q9NPB8 672 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 TBC1D7Q9P0N9 293 aa19.77■□□□□ 0.76
RAB40C-206ENST00000561781 ARMCX3Q9UH62 379 aaPredicted RBP19.77■□□□□ 0.76
RAB40C-206ENST00000561781 PFASO15067 1338 aa19.77■□□□□ 0.75
RAB40C-206ENST00000561781 CYP2D7A0A087X1C5 515 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 M0R2N6 131 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 PODXLO00592 558 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 GSC2O15499 205 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 ALDH2P05091 517 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 SLC5A1P13866 664 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 DCAF12L1Q5VU92 463 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 ZBED8Q8IZ13 594 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 NUP93Q8N1F7 819 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 GANQ9H2C0 597 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 PCDHA6Q9UN73 950 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 PCDHA8Q9Y5H6 950 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 KANSL1LA0AUZ9 987 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms