RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 C1orf159Q96HA4 380 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 JMJD8Q96S16 334 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 PHF20Q9BVI0 1012 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 HIPK3Q9H422 1215 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 SP110Q9HB58 689 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 USP40Q9NVE5 1235 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 CHPF2Q9P2E5 772 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 GULP1Q9UBP9 304 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 TSPYL4Q9UJ04 414 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 RWDD3Q9Y3V2 267 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 TAF6LQ9Y6J9 622 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 VPS13AQ96RL7 3174 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 SPEF2Q9C093 1822 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 FAM208BQ5VWN6 2430 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 SMCHD1A6NHR9 2005 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 FLNBO75369 2602 aaKnown RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 USP24Q9UPU5 2620 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 CACNA1HO95180 2353 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 CCDC163A0A0D9SF12 145 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 ZC3H12DA2A288 527 aaKnown RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 C7orf72A4D263 438 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 ARVCFO00192 962 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 NPHS1O60500 1241 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 FRAT2O75474 233 aaPredicted RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 FUCA1P04066 466 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 HOXC6P09630 235 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 PRKCAP17252 672 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 TACR1P25103 407 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 HOXA7P31268 230 aaPredicted RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 LTBRP36941 435 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 KIR2DL1P43626 348 aaPredicted RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 KIR2DL2P43627 348 aaPredicted RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 CCNA1P78396 465 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 DLX2Q07687 328 aaPredicted RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 TCEA2Q15560 299 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 TKFCQ3LXA3 575 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 HSF5Q4G112 596 aaPredicted RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 TCEAL5Q5H9L2 206 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 E4F1Q66K89 784 aaPredicted RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 GALNT18Q6P9A2 607 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 C15orf52Q6ZUT6 534 aaKnown RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 C16orf86Q6ZW13 317 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 MTDHQ86UE4 582 aaKnown RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 SLCO6A1Q86UG4 719 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 HERC6Q8IVU3 1022 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 FAM126BQ8IXS8 530 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 SYT8Q8NBV8 401 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 CCDC191Q8NCU4 936 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 RCBTB1Q8NDN9 531 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 NUP43Q8NFH3 380 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 CYP2W1Q8TAV3 490 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 DCAF4Q8WV16 495 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 PTPRN2Q92932 1015 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 DACT3Q96B18 629 aaPredicted RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 GLT1D1Q96MS3 346 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 MMP19Q99542 508 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 GPR20Q99678 358 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 HNRNPABQ99729 332 aaKnown RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 WNT8AQ9H1J5 351 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 NCOA5Q9HCD5 579 aaKnown RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 CWC25Q9NXE8 425 aaPredicted RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 TMOD4Q9NZQ9 345 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 MARCH2Q9P0N8 246 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 IMPACTQ9P2X3 320 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 PALD1Q9ULE6 856 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 TIMM13Q9Y5L4 95 aaPredicted RBP3.91□□□□□ -1.78
SPG11-225ENST00000561391 R4GN57 208 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 MROH7Q68CQ1 1323 aa3.91□□□□□ -1.78
SPG11-225ENST00000561391 GVINP1Q7Z2Y8 2422 aa3.9□□□□□ -1.78
SPG11-225ENST00000561391 DDTLA6NHG4 134 aaPredicted RBP3.9□□□□□ -1.79
SPG11-225ENST00000561391 NOTOA8MTQ0 251 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 PPP1R11O60927 126 aaPredicted RBP3.9□□□□□ -1.79
SPG11-225ENST00000561391 CNMDO75829 334 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 APPP05067 770 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 SRGAP2CP0DJJ0 459 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 SDHBP21912 280 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 HSD3B2P26439 372 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 BCL6P41182 706 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 EPHB3P54753 998 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 RPL11P62913 178 aaKnown RBP3.9□□□□□ -1.79
SPG11-225ENST00000561391 GABREP78334 506 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 CYP4F8P98187 520 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 GUCY1A3Q02108 690 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 EFEMP1Q12805 493 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 KCNAB2Q13303 367 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 GRB14Q14449 540 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 WDR43Q15061 677 aaKnown RBP eCLIP3.9□□□□□ -1.79
SPG11-225ENST00000561391 KRT24Q2M2I5 525 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 CC2D1BQ5T0F9 858 aaKnown RBP3.9□□□□□ -1.79
SPG11-225ENST00000561391 ACBD5Q5T8D3 534 aaPredicted RBP3.9□□□□□ -1.79
SPG11-225ENST00000561391 OLFML2BQ68BL8 750 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 BICRALQ6AI39 1079 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 HHIPL2Q6UWX4 724 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 CEP68Q76N32 757 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 TEX2Q8IWB9 1127 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 DHX37Q8IY37 1157 aaKnown RBP3.9□□□□□ -1.79
SPG11-225ENST00000561391 IFNL3Q8IZI9 196 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 SLC7A14Q8TBB6 771 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 PHOSPHO2Q8TCD6 241 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 RUBCNQ92622 972 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms