RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	DPCR1	Q3MIW9	517 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	ZSCAN23	Q3MJ62	389 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	PRPF38B	Q5VTL8	546 aa	Known RBP	10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	ISM2	Q6H9L7	571 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	ZBTB33	Q86T24	672 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	ZC3H3	Q8IXZ2	948 aa	Known RBP	10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	SMG8	Q8ND04	991 aa	Known RBP	10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	URGCP	Q8TCY9	931 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	NOC3L	Q8WTT2	800 aa	Known RBP	10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	NELFB	Q8WX92	580 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	ZBTB45	Q96K62	511 aa	Predicted RBP	10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	BPIFA3	Q9BQP9	254 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	TMEM117	Q9H0C3	514 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	PRO3102	Q9H379	93 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	SEMA6B	Q9H3T3	888 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	RPF1	Q9H9Y2	349 aa	Known RBP	10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	RSAD1	Q9HA92	442 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	CPSF3	Q9UKF6	684 aa	Known RBP	10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	DERA	Q9Y315	318 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	INSL6	Q9Y581	213 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	SCN5A	Q14524	2016 aa		10.77	□□□□□ -0.69
KNSTRN-215	ENST00000561367	TNRC18	O15417	2968 aa	Predicted RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	SLC16A3	O15427	465 aa	Known RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	DGKI	O75912	1065 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	ATF7	P17544	494 aa	Predicted RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	PSMC2	P35998	433 aa	Known RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	AP3M2	P53677	418 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	HTRA4	P83105	476 aa	Predicted RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	PPP2R3A	Q06190	1150 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	SHH	Q15465	462 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	SNRNP35	Q16560	246 aa	Known RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	TCTN1	Q2MV58	587 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	XKR4	Q5GH76	650 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	ANKRD40	Q6AI12	368 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	TTI2	Q6NXR4	508 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	AGMO	Q6ZNB7	445 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	INTS8	Q75QN2	995 aa	Known RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	FILIP1	Q7Z7B0	1213 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	CDR2L	Q86X02	465 aa	Predicted RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	HERC6	Q8IVU3	1022 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	FAM114A1	Q8IWE2	563 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	THNSL1	Q8IYQ7	743 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	CMTR2	Q8IYT2	770 aa	Known RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	ENOX1	Q8TC92	643 aa	Known RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	ZNF689	Q96CS4	500 aa	Predicted RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	RPS6KC1	Q96S38	1066 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	RAD9A	Q99638	391 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	CBWD1	Q9BRT8	395 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	HAPLN2	Q9GZV7	340 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	NXF3	Q9H4D5	531 aa	Known RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	METTL14	Q9HCE5	456 aa	Known RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	SLC38A7	Q9NVC3	462 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	CNTN3	Q9P232	1028 aa		10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	FCF1	Q9Y324	198 aa	Known RBP	10.76	□□□□□ -0.69
KNSTRN-215	ENST00000561367	MICAL3	Q7RTP6	2002 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	TTC26	A0AVF1	554 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	SYCE3	A1L190	88 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	ARL5C	A6NH57	179 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	CLIC2	O15247	247 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	RECQL4	O94761	1208 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	EPB41	P11171	864 aa	Known RBP	10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	HARS	P12081	509 aa	Known RBP	10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	KCNE1	P15382	129 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	PAX3	P23760	479 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	CYP2J2	P51589	502 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	MCCD1	P59942	119 aa	Predicted RBP	10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	DEFB103A	P81534	67 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	GRIK3	Q13003	919 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	RAB30	Q15771	203 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	TPD52L1	Q16890	204 aa	Predicted RBP	10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	MSS51	Q4VC12	460 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	NOMO2	Q5JPE7	1267 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	C9orf50	Q5SZB4	431 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	ZNF697	Q5TEC3	545 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	KLHL10	Q6JEL2	608 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	ALKAL1	Q6UXT8	129 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	BRSK2	Q8IWQ3	736 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	LRRC43	Q8N309	656 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	CSGALNACT2	Q8N6G5	542 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	SNX27	Q96L92	541 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	YME1L1	Q96TA2	773 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	FAM213A	Q9BRX8	229 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	FUCA2	Q9BTY2	467 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	THAP9	Q9H5L6	903 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	SNTG2	Q9NY99	539 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	RBAK	Q9NYW8	714 aa	Predicted RBP	10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	PARP2	Q9UGN5	583 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	CTNND2	Q9UQB3	1225 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	USP20	Q9Y2K6	914 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	RWDD3	Q9Y3V2	267 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	C2CD2	Q9Y426	696 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	TTC3	P53804	2025 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	TET1	Q8NFU7	2136 aa		10.75	□□□□□ -0.69
KNSTRN-215	ENST00000561367	SMTNL1	A8MU46	457 aa		10.74	□□□□□ -0.69
KNSTRN-215	ENST00000561367	TISP43	B9A030	160 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms