RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 SUMF1Q8NBK3 374 aa13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 NELL2Q99435 816 aa13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 AVENQ9NQS1 362 aaPredicted RBP13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 HCFC1R1Q9NWW0 138 aa13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 RBM19Q9Y4C8 960 aaKnown RBP13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 CDY1Q9Y6F8 540 aa13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 CACNA1IQ9P0X4 2223 aa13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 NOTCH4Q99466 2003 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 VPS13AQ96RL7 3174 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 FAM170BA6NMN3 283 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 LAMTOR5O43504 91 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 KINO60870 393 aaKnown RBP13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 ECI2O75521 394 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 OR52Z1P0C646 297 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 LIG1P18858 919 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 IGFBP6P24592 240 aaPredicted RBP13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 PUM1Q14671 1186 aaKnown RBP eCLIP13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 XKR4Q5GH76 650 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 GLRA4Q5JXX5 417 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 NT5DC1Q5TFE4 455 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 ATF7IP2Q5U623 682 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 HAUS3Q68CZ6 603 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 SLC8B1Q6J4K2 584 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 ZNF461Q8TAF7 563 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 KIFAP3Q92845 792 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 DDX27Q96GQ7 796 aaKnown RBP13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 IFT74Q96LB3 600 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 KXD1Q9BQD3 176 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 LTB4R2Q9NPC1 389 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 SPATA6Q9NWH7 488 aaPredicted RBP13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 GDE1Q9NZC3 331 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 TNFSF13BQ9Y275 285 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 MRPS23Q9Y3D9 190 aaKnown RBP13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 MIA3Q5JRA6 1907 aa13.01□□□□□ -0.33
CARMIL3-204ENST00000561354 SMIM28A0A1B0GU29 152 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 ARHGEF37A1IGU5 675 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 K7ERI5 159 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 SPTLC1O15269 473 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 TKTP29401 623 aaKnown RBP13□□□□□ -0.33
CARMIL3-204ENST00000561354 FOSBP53539 338 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 UBXN2BQ14CS0 331 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 ZNF174Q15697 407 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 ZBTB41Q5SVQ8 909 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 ALKAL1Q6UXT8 129 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 DGLUCYQ7Z3D6 616 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 C3orf58Q8NDZ4 430 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 CLDN23Q96B33 292 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 HINFPQ9BQA5 517 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 KIFC3Q9BVG8 833 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 DLL3Q9NYJ7 618 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 MTF2Q9Y483 593 aaPredicted RBP13□□□□□ -0.33
CARMIL3-204ENST00000561354 PCDHGA2Q9Y5H1 932 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 DMDP11532 3685 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 DCHS1Q96JQ0 3298 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 OTOGLQ3ZCN5 2332 aa13□□□□□ -0.33
CARMIL3-204ENST00000561354 NCAM2O15394 837 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 TBC1D4O60343 1298 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 MICAL2O94851 1124 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 ABLIM3O94929 683 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 RHOP08100 348 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 PTPN2P17706 415 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 GRM5P41594 1212 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 RPS9P46781 194 aaKnown RBP12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 NEK4P51957 841 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 YARSP54577 528 aaKnown RBP12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 ROR1Q01973 937 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 ST3GAL1Q11201 340 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 SLC5A9Q2M3M2 681 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 DCLK2Q8N568 766 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 ZBTB44Q8NCP5 570 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 ING5Q8WYH8 240 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 NELL1Q92832 810 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 ELSPBP1Q96BH3 223 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 MCRS1Q96EZ8 462 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 CCDC94Q9BW85 323 aaPredicted RBP12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 BHMT2Q9H2M3 363 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 FOXP1Q9H334 677 aaPredicted RBP12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 GOLGA2P5Q9HBQ8 144 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 PTPRHQ9HD43 1115 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 TOPORSQ9NS56 1045 aaPredicted RBP12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 SLC38A7Q9NVC3 462 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 COL4A3Q01955 1670 aa12.99□□□□□ -0.33
CARMIL3-204ENST00000561354 PHLPP2Q6ZVD8 1323 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 PATJQ8NI35 1801 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 I3L4J1 428 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 SYN3O14994 580 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 LRG1P02750 347 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 ATF2P15336 505 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 CD72P21854 359 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 TARSP26639 723 aaKnown RBP12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 ELF1P32519 619 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 CCT6AP40227 531 aaKnown RBP12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 BRCC3P46736 316 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 TRAPPC10P48553 1259 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 GUCY1B3Q02153 619 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 SOX4Q06945 474 aaPredicted RBP12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 PDIA5Q14554 519 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 ECM1Q16610 540 aa12.98□□□□□ -0.33
CARMIL3-204ENST00000561354 TTC38Q5R3I4 469 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms