RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 FAM228AQ86W67 206 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 CCDC170Q8IYT3 715 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 CEP120Q8N960 986 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 LMO3Q8TAP4 145 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 KIAA1524Q8TCG1 905 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 TAS1R2Q8TE23 839 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 U2AF1L4Q8WU68 220 aaKnown RBP11.12□□□□□ -0.63
USP3-219ENST00000561326 BAP1Q92560 729 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 WNT8BQ93098 351 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 TMEM106CQ9BVX2 250 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 SIX2Q9NPC8 291 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 C1orf112Q9NSG2 853 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 AIPL1Q9NZN9 384 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 DNAJC12Q9UKB3 198 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 DERAQ9Y315 318 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 TDRD15B5MCY1 1934 aaKnown RBP11.11□□□□□ -0.63
USP3-219ENST00000561326 HTTP42858 3142 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 LRRC53A6NM62 1247 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 EPHB6O15197 1021 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 ZSCAN12O43309 604 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 OFD1O75665 1012 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 SERPING1P05155 500 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 FERP16591 822 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 CYLC1P35663 651 aaPredicted RBP11.11□□□□□ -0.63
USP3-219ENST00000561326 TMEM132DQ14C87 1099 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 ASIC2Q16515 512 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 MEA1Q16626 185 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 SLC10A6Q3KNW5 377 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 ZNF618Q5T7W0 954 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 TDRD10Q5VZ19 366 aaKnown RBP11.11□□□□□ -0.63
USP3-219ENST00000561326 LMBRD2Q68DH5 695 aaPredicted RBP11.11□□□□□ -0.63
USP3-219ENST00000561326 SMYD5Q6GMV2 418 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 IQCEQ6IPM2 695 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 PHLDB3Q6NSJ2 640 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 DPY19L2P1Q6NXN4 242 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 SLC39A5Q6ZMH5 540 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 TRAPPC11Q7Z392 1133 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 DHX38Q92620 1227 aaKnown RBP11.11□□□□□ -0.63
USP3-219ENST00000561326 TAF4BQ92750 862 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 JAKMIP2Q96AA8 810 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 CCDC42Q96M95 316 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 ERVK-5Q9HDB9 667 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 PARP2Q9UGN5 583 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 PADI3Q9ULW8 664 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 C2CD2Q9Y426 696 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.11□□□□□ -0.63
USP3-219ENST00000561326 FHOD1Q9Y613 1164 aa11.11□□□□□ -0.63
USP3-219ENST00000561326 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 CLSTN1O94985 981 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 PARNO95453 639 aaKnown RBP11.1□□□□□ -0.63
USP3-219ENST00000561326 CD4P01730 458 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 GHRP10912 638 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 SELPP16109 830 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 TBXAS1P24557 533 aaPredicted RBP11.1□□□□□ -0.63
USP3-219ENST00000561326 GJA8P48165 433 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 RAB27AP51159 221 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 KLHL30Q0D2K2 578 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 LPIN1Q14693 890 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 DRAP1Q14919 205 aaPredicted RBP11.1□□□□□ -0.63
USP3-219ENST00000561326 ARHGAP44Q17R89 818 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 JADE1Q6IE81 842 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 WDR59Q6PJI9 974 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 VPS36Q86VN1 386 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 TMEM139Q8IV31 216 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 FAM126BQ8IXS8 530 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 TMEM192Q8IY95 271 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 PPM1KQ8N3J5 372 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 OR5B17Q8NGF7 314 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 SEMA4DQ92854 862 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 TOX2Q96NM4 488 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 TRAIPQ9BWF2 469 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 EIF2AQ9BY44 585 aaKnown RBP11.1□□□□□ -0.63
USP3-219ENST00000561326 DEF6Q9H4E7 631 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 SNTG2Q9NY99 539 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 PYCARDQ9ULZ3 195 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 PCDHB2Q9Y5E7 798 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 EPN1Q9Y6I3 576 aaPredicted RBP11.1□□□□□ -0.63
USP3-219ENST00000561326 MYH10P35580 1976 aa11.1□□□□□ -0.63
USP3-219ENST00000561326 SCN1AP35498 2009 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 SSU72P8A0A1W2PR75 194 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 AKR1B10O60218 316 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 VNN1O95497 513 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 KRT19P08727 400 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 CCDC175P0C221 793 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 ITGA4P13612 1032 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 P4HA1P13674 534 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 ANXA13P27216 316 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 CD52P31358 61 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 ATICP31939 592 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 SOX5P35711 763 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 WNT7BP56706 349 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 JAM2P57087 298 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 KRT83P78385 493 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 RBP5P82980 135 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 APBA1Q02410 837 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 GCNT1Q02742 428 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 ARID5AQ03989 594 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 SPA17Q15506 151 aa11.09□□□□□ -0.63
USP3-219ENST00000561326 UBXN11Q5T124 520 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms