RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 NOTCH4Q99466 2003 aa17.48■□□□□ 0.39
LMX1B-204ENST00000561065 I3L4J1 428 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 TXLNAP40222 546 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 BRCC3P46736 316 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 MCM6Q14566 821 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 NOLC1Q14978 699 aaKnown RBP eCLIP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 RSPO2Q6UXX9 243 aaPredicted RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 CEP57Q86XR8 500 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 PBXIP1Q96AQ6 731 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 ZNF396Q96N95 335 aaPredicted RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 RHOBTB2Q9BYZ6 727 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 CNTN3Q9P232 1028 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 LIMD1Q9UGP4 676 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 CLUHO75153 1309 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 TSC2P49815 1807 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 TOM1L1O75674 476 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 B3GAT3O94766 335 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 FGFR3P22607 806 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 TKTP29401 623 aaKnown RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 ZNF131P52739 623 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 SMTNP53814 917 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 YARSP54577 528 aaKnown RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 VCPP55072 806 aaKnown RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 CREMQ03060 361 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 MTMR3Q13615 1198 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 DHX8Q14562 1220 aaKnown RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 SPECC1Q5M775 1068 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 HDAC7Q8WUI4 952 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 SMG7Q92540 1137 aaKnown RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 RAD54LQ92698 747 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 KCNN1Q92952 543 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 C18orf25Q96B23 403 aaPredicted RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 DDX27Q96GQ7 796 aaKnown RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 FIZ1Q96SL8 496 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 PLEKHA4Q9H4M7 779 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 WDR6Q9NNW5 1121 aaKnown RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 TOPORSQ9NS56 1045 aaPredicted RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 CCDC39Q9UFE4 941 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 FBXO2Q9UK22 296 aaPredicted RBP17.47■□□□□ 0.39
LMX1B-204ENST00000561065 ODF2LQ9ULJ1 636 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 MTMR6Q9Y217 621 aa17.47■□□□□ 0.39
LMX1B-204ENST00000561065 C1RP00736 705 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 KCNE1P15382 129 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 SCP2P22307 547 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 MARCKSP29966 332 aaPredicted RBP17.46■□□□□ 0.38
LMX1B-204ENST00000561065 MCL1Q07820 350 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 ELAVL2Q12926 359 aaKnown RBP17.46■□□□□ 0.38
LMX1B-204ENST00000561065 STRN3Q13033 797 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 SLC10A6Q3KNW5 377 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 IER5LQ5T953 404 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 ZPBP2Q6X784 338 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 FBXL6Q8N531 539 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 EPSTI1Q96J88 318 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 MFSD14AQ96MC6 490 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 UROC1Q96N76 676 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 ACAP3Q96P50 834 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 MYADMQ96S97 322 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 TCHPQ9BT92 498 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 ZDHHC7Q9NXF8 308 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 MTRRQ9UBK8 725 aa17.46■□□□□ 0.38
LMX1B-204ENST00000561065 H0YCG3 227 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 PODXLO00592 558 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 FAM189A1O60320 539 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 ZMYND10O75800 440 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 CXCL8P10145 99 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 ZBTB41Q5SVQ8 909 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 SLC39A4Q6P5W5 647 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 DCLRE1AQ6PJP8 1040 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 OTOP3Q7RTS5 596 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 HAUS6Q7Z4H7 955 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 PLCD3Q8N3E9 789 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 PRSS33Q8NF86 280 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 LARP4BQ92615 738 aaKnown RBP17.45■□□□□ 0.38
LMX1B-204ENST00000561065 CLIC6Q96NY7 704 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 PRKD2Q9BZL6 878 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 CCSER1Q9C0I3 900 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 LARSQ9P2J5 1176 aaKnown RBP17.45■□□□□ 0.38
LMX1B-204ENST00000561065 TUBGCP4Q9UGJ1 667 aa17.45■□□□□ 0.38
LMX1B-204ENST00000561065 K7ENM7 598 aa17.44■□□□□ 0.38
LMX1B-204ENST00000561065 ABCD1P33897 745 aa17.44■□□□□ 0.38
LMX1B-204ENST00000561065 TNFSF9P41273 254 aa17.44■□□□□ 0.38
LMX1B-204ENST00000561065 CYP26C1Q6V0L0 522 aa17.44■□□□□ 0.38
LMX1B-204ENST00000561065 UBALD2Q8IYN6 164 aa17.44■□□□□ 0.38
LMX1B-204ENST00000561065 ACSF2Q96CM8 615 aaPredicted RBP17.44■□□□□ 0.38
LMX1B-204ENST00000561065 USP28Q96RU2 1077 aa17.44■□□□□ 0.38
LMX1B-204ENST00000561065 DPP7Q9UHL4 492 aa17.44■□□□□ 0.38
LMX1B-204ENST00000561065 MYO15AQ9UKN7 3530 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 FAM13AO94988 1023 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 PIGRP01833 764 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 C8AP07357 584 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 OR1D2P34982 312 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 CEBPZQ03701 1054 aaKnown RBP17.43■□□□□ 0.38
LMX1B-204ENST00000561065 SPAG1Q07617 926 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 RAB33AQ14088 237 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 BECN1Q14457 450 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 ATL3Q6DD88 541 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 ELMSAN1Q6PJG2 1045 aa17.43■□□□□ 0.38
LMX1B-204ENST00000561065 GET4Q7L5D6 327 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms