RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 A0A1B0GUA9 196 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 ANKRD62A6NC57 917 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 TULP1O00294 542 aaPredicted RBP13.88□□□□□ -0.19
SNX1-211ENST00000560829 KPNA6O60684 536 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 ASS1P00966 412 aaKnown RBP13.88□□□□□ -0.19
SNX1-211ENST00000560829 TCP1P17987 556 aaKnown RBP13.88□□□□□ -0.19
SNX1-211ENST00000560829 ACO1P21399 889 aaKnown RBP13.88□□□□□ -0.19
SNX1-211ENST00000560829 USP8P40818 1118 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 NKX3-2P78367 333 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 IRX5P78411 483 aaPredicted RBP13.88□□□□□ -0.19
SNX1-211ENST00000560829 CDR2Q01850 454 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 CUL2Q13617 745 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 TCEAL1Q15170 157 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 ELF2Q15723 593 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 FSCN1Q16658 493 aaKnown RBP13.88□□□□□ -0.19
SNX1-211ENST00000560829 SLC47A2Q86VL8 602 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 PALB2Q86YC2 1186 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 CEP120Q8N960 986 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 DDX1Q92499 740 aaKnown RBP13.88□□□□□ -0.19
SNX1-211ENST00000560829 TLR10Q9BXR5 811 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 ARHGAP39Q9C0H5 1083 aa13.88□□□□□ -0.19
SNX1-211ENST00000560829 RPF1Q9H9Y2 349 aaKnown RBP13.88□□□□□ -0.19
SNX1-211ENST00000560829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.192e-11■■■■■ 198.7
SNX1-211ENST00000560829 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.88□□□□□ -0.19
SNX1-211ENST00000560829 V9GYY5 206 aaPredicted RBP13.88□□□□□ -0.19
SNX1-211ENST00000560829 GRID2IPA4D2P6 1211 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 PHACTR2O75167 634 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 GPR32O75388 356 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 PALMO75781 387 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 PDE6CP51160 858 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 NAP1L1P55209 391 aaKnown RBP13.87□□□□□ -0.19
SNX1-211ENST00000560829 GJA9P57773 515 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 CHMP4BP1P59074 171 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 NOP14P78316 857 aaKnown RBP13.87□□□□□ -0.19
SNX1-211ENST00000560829 PURAQ00577 322 aaKnown RBP13.87□□□□□ -0.19
SNX1-211ENST00000560829 FMO1Q01740 532 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 MFSD14CQ5VZR4 134 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 CDR2LQ86X02 465 aaPredicted RBP13.87□□□□□ -0.19
SNX1-211ENST00000560829 ZNF677Q86XU0 584 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 EFCAB13Q8IY85 973 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 RFFLQ8WZ73 363 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 TRIB2Q92519 343 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 GOLGA1Q92805 767 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 PCDHB18PQ96TA0 734 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 MTMR12Q9C0I1 747 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 GABRQQ9UN88 632 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 HYOU1Q9Y4L1 999 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 CSDE1O75534 798 aaKnown RBP13.87□□□□□ -0.19
SNX1-211ENST00000560829 ERLIN2O94905 339 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 CST3P01034 146 aaPredicted RBP13.87□□□□□ -0.19
SNX1-211ENST00000560829 MYL3P08590 195 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 STAG3L1P0CL83 205 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 CYP2C9P11712 490 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 FLT3LGP49771 235 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 BPIFB4P59827 614 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 HIC1Q14526 733 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 MEI1Q5TIA1 1274 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 SPOPLQ6IQ16 392 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 PAXIP1Q6ZW49 1069 aaPredicted RBP13.87□□□□□ -0.19
SNX1-211ENST00000560829 SLFN11Q7Z7L1 901 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 DNAAF5Q86Y56 855 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 UBR7Q8N806 425 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 LRRC57Q8N9N7 239 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 TPCN2Q8NHX9 752 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 CTNNBL1Q8WYA6 563 aaPredicted RBP13.87□□□□□ -0.19
SNX1-211ENST00000560829 CALR3Q96L12 384 aaKnown RBP13.87□□□□□ -0.19
SNX1-211ENST00000560829 SCLT1Q96NL6 688 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 PPP1R16BQ96T49 567 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 ARID3AQ99856 593 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 CFHR5Q9BXR6 569 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 GCOM2Q9BZD3 368 aaPredicted RBP13.87□□□□□ -0.19
SNX1-211ENST00000560829 IMPG2Q9BZV3 1241 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 UPF3AQ9H1J1 476 aaKnown RBP13.87□□□□□ -0.19
SNX1-211ENST00000560829 ASB7Q9H672 318 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 TAS2R14Q9NYV8 317 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 NUB1Q9Y5A7 615 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 PCDHB2Q9Y5E7 798 aa13.87□□□□□ -0.19
SNX1-211ENST00000560829 CTAGE15A4D2H0 777 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 MEFVO15553 781 aaPredicted RBP13.86□□□□□ -0.19
SNX1-211ENST00000560829 RTN2O75298 545 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 TBC1D8O95759 1140 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 TFRCP02786 760 aaKnown RBP13.86□□□□□ -0.19
SNX1-211ENST00000560829 CTAGE8P0CG41 777 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 CXCL8P10145 99 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 HADHBP55084 474 aaKnown RBP13.86□□□□□ -0.19
SNX1-211ENST00000560829 BEX3Q00994 111 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 CKAP4Q07065 602 aaKnown RBP13.86□□□□□ -0.19
SNX1-211ENST00000560829 KIZQ2M2Z5 673 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 SGSM1Q2NKQ1 1148 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 CTAGE6Q86UF2 777 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 CTAGE4Q8IX94 777 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 RABGGTAQ92696 567 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 ELMO3Q96BJ8 720 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 FAXDC2Q96IV6 333 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 ANKRD36BP1Q96IX9 119 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 CPB2Q96IY4 423 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 RPGRIP1Q96KN7 1286 aa13.86□□□□□ -0.19
SNX1-211ENST00000560829 PUF60Q9UHX1 559 aaKnown RBP13.86□□□□□ -0.19
SNX1-211ENST00000560829 SRGAP2O75044 1071 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 TNNC2P02585 160 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms