RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 LOC730098B7Z3J9 87 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 TEX28O15482 410 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 KIF4AO95239 1232 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 MYBP10242 640 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 PROZP22891 400 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 SP100P23497 879 aaPredicted RBP16.11■□□□□ 0.17
IDH3A-219ENST00000560414 IGFBP6P24592 240 aaPredicted RBP16.11■□□□□ 0.17
IDH3A-219ENST00000560414 GRM5P41594 1212 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 CLCN4P51793 760 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 DSG1Q02413 1049 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 FOXD4L5Q5VV16 416 aaPredicted RBP16.11■□□□□ 0.17
IDH3A-219ENST00000560414 KIAA1841Q6NSI8 718 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 APBB1IPQ7Z5R6 666 aaPredicted RBP16.11■□□□□ 0.17
IDH3A-219ENST00000560414 PPFIBP1Q86W92 1011 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 RNF135Q8IUD6 432 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 HSCBQ8IWL3 235 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 FOXD4L4Q8WXT5 416 aaPredicted RBP16.11■□□□□ 0.17
IDH3A-219ENST00000560414 CCDC94Q9BW85 323 aaPredicted RBP16.11■□□□□ 0.17
IDH3A-219ENST00000560414 ADAM7Q9H2U9 754 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 C11orf16Q9NQ32 467 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 CHST7Q9NS84 486 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 MUTYHQ9UIF7 546 aa16.11■□□□□ 0.17
IDH3A-219ENST00000560414 MYH11P35749 1972 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 DCXO43602 365 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 FAM13AO94988 1023 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 KRT18P05783 430 aaKnown RBP16.1■□□□□ 0.17
IDH3A-219ENST00000560414 MCF2P10911 925 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 CLCN1P35523 988 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 DDIT3P35638 169 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 USP41Q3LFD5 358 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 SEZ6Q53EL9 994 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 CES5AQ6NT32 575 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 MPZL3Q6UWV2 235 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 TMC5Q6UXY8 1006 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 HAUS6Q7Z4H7 955 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 GLYCTKQ8IVS8 523 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 MYCT1Q8N699 235 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 RIN2Q8WYP3 895 aaPredicted RBP16.1■□□□□ 0.17
IDH3A-219ENST00000560414 LARP4BQ92615 738 aaKnown RBP16.1■□□□□ 0.17
IDH3A-219ENST00000560414 FBXL18Q96ME1 805 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 PPP1R10Q96QC0 940 aaKnown RBP16.1■□□□□ 0.17
IDH3A-219ENST00000560414 ZHX3Q9H4I2 956 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 ZSCAN16Q9H4T2 348 aaPredicted RBP16.1■□□□□ 0.17
IDH3A-219ENST00000560414 GOLGA2P5Q9HBQ8 144 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 RXFP1Q9HBX9 757 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 DZANK1Q9NVP4 752 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 LARSQ9P2J5 1176 aaKnown RBP16.1■□□□□ 0.17
IDH3A-219ENST00000560414 ANKFY1Q9P2R3 1169 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 KCNG1Q9UIX4 513 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 ODF2LQ9ULJ1 636 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 SSX2IPQ9Y2D8 614 aa16.1■□□□□ 0.17
IDH3A-219ENST00000560414 SMIM28A0A1B0GU29 152 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 SMAPO00193 183 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 TOM1L1O75674 476 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 BRD1O95696 1058 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 ALADP13716 330 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 RPL17P18621 184 aaKnown RBP16.09■□□□□ 0.17
IDH3A-219ENST00000560414 YARSP54577 528 aaKnown RBP16.09■□□□□ 0.17
IDH3A-219ENST00000560414 NCKAP1LP55160 1127 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 LSM11P83369 360 aaKnown RBP eCLIP16.09■□□□□ 0.17
IDH3A-219ENST00000560414 ITIH3Q06033 890 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 SLC39A14Q15043 492 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 TMEM31Q5JXX7 168 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 RTP2Q5QGT7 225 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 ALKAL1Q6UXT8 129 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 ACAP3Q96P50 834 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 LRFN3Q9BTN0 628 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 PANK2Q9BZ23 570 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 POMKQ9H5K3 350 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 TFIP11Q9UBB9 837 aaKnown RBP16.09■□□□□ 0.17
IDH3A-219ENST00000560414 RAPGEFL1Q9UHV5 662 aa16.09■□□□□ 0.17
IDH3A-219ENST00000560414 TRIP11Q15643 1979 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 TK2O00142 265 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 MEFVO15553 781 aaPredicted RBP16.08■□□□□ 0.16
IDH3A-219ENST00000560414 ADH1AP07327 375 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 HSP90AA1P07900 732 aaKnown RBP16.08■□□□□ 0.16
IDH3A-219ENST00000560414 SPATA31D3P0C874 917 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 CLCNKBP51801 687 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 ZNF131P52739 623 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 SOX4Q06945 474 aaPredicted RBP16.08■□□□□ 0.16
IDH3A-219ENST00000560414 FAM171A1Q5VUB5 890 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 PRSS55Q6UWB4 352 aaPredicted RBP16.08■□□□□ 0.16
IDH3A-219ENST00000560414 SPATA31D4Q6ZUB0 917 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 CEP57Q86XR8 500 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 PALB2Q86YC2 1186 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 BICD1Q96G01 975 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 ZMAT2Q96NC0 199 aaKnown RBP16.08■□□□□ 0.16
IDH3A-219ENST00000560414 HAPLN2Q9GZV7 340 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 PARVGQ9HBI0 331 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 TOPORSQ9NS56 1045 aaPredicted RBP16.08■□□□□ 0.16
IDH3A-219ENST00000560414 CCDC39Q9UFE4 941 aa16.08■□□□□ 0.16
IDH3A-219ENST00000560414 SF3B1O75533 1304 aaKnown RBP eCLIP16.08■□□□□ 0.16
IDH3A-219ENST00000560414 RCCD1A6NED2 376 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 K7ENM7 598 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 CLDN3O15551 220 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 TRAK2O60296 914 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 GPR37L1O60883 481 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 NMT1P30419 496 aaKnown RBP16.07■□□□□ 0.16
IDH3A-219ENST00000560414 MTHFRP42898 656 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 MATR3P43243 847 aaKnown RBP eCLIP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms