RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 UPP1Q16831 310 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 USP41Q3LFD5 358 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 FAM171A1Q5VUB5 890 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 KIAA1841Q6NSI8 718 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 SPATA31D4Q6ZUB0 917 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 GLYCTKQ8IVS8 523 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 FBXL18Q96ME1 805 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 FGFBP2Q9BYJ0 223 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 RXFP1Q9HBX9 757 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 CNTN3Q9P232 1028 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 PPP1R37O75864 691 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 B3GAT3O94766 335 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 PDIA4P13667 645 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 SP100P23497 879 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 CASP5P51878 434 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 TPRNQ4KMQ1 711 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 DCLRE1AQ6PJP8 1040 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 TMC5Q6UXY8 1006 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 ZNF720Q7Z2F6 126 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 PPFIBP1Q86W92 1011 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 CEP57Q86XR8 500 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 PALB2Q86YC2 1186 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 MAP4K3Q8IVH8 894 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 DHX58Q96C10 678 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 RPGRIP1Q96KN7 1286 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 PHF7Q9BWX1 381 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 ADAM7Q9H2U9 754 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 TUBGCP4Q9UGJ1 667 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 PCDHA7Q9UN72 937 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 C2orf16Q68DN1 1984 aa12.72□□□□□ -0.37
RABGGTA-216ENST00000560243 TCHHQ07283 1943 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 MTCL1Q9Y4B5 1905 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 A0A0B4J269 797 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 TTC26A0AVF1 554 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 LOC730098B7Z3J9 87 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 ADAM12O43184 909 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 ADH1AP07327 375 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 CLTAP09496 248 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 IDEP14735 1019 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 BRCC3P46736 316 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 ME1P48163 572 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 ENOX2Q16206 610 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 GLIS3Q8NEA6 775 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 LNX1Q8TBB1 728 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 KCNG4Q8TDN1 519 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 HPS3Q969F9 1004 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 POP1Q99575 1024 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 TTPALQ9BTX7 342 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 STRA6Q9BX79 667 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 ST6GALNAC4Q9H4F1 302 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 POMKQ9H5K3 350 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 MRPL44Q9H9J2 332 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 MAN1C1Q9NR34 630 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 DZANK1Q9NVP4 752 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 RCOR1Q9UKL0 485 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 SSX2IPQ9Y2D8 614 aa12.71□□□□□ -0.37
RABGGTA-216ENST00000560243 ANK1P16157 1881 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 FRMD3A2A2Y4 597 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 FAM86C2PA6NEL3 165 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 LACTBL1A8MY62 500 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 PI4K2BG5E9Z4 385 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 TMEM189-UBE2V1I3L0A0 370 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 PODXLO00592 558 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 OGTO15294 1046 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 TGM5O43548 720 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 GLUD1P00367 558 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 GAP43P17677 238 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 SCP2P22307 547 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 FGFR3P22607 806 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 TKTP29401 623 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 ACOT2P49753 483 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 GUCY2FP51841 1108 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 ITIH3Q06033 890 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 HERC4Q5GLZ8 1057 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 CES5AQ6NT32 575 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 RNF135Q8IUD6 432 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 PIK3R5Q8WYR1 880 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 UROC1Q96N76 676 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 CLSTN3Q9BQT9 956 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 MSTO1Q9BUK6 570 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 C11orf16Q9NQ32 467 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 SLC38A7Q9NVC3 462 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 PANK4Q9NVE7 773 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 KBTBD4Q9NVX7 518 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 FNIP2Q9P278 1114 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 SEL1LQ9UBV2 794 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 MUTYHQ9UIF7 546 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 DOCK6Q96HP0 2047 aa12.7□□□□□ -0.38
RABGGTA-216ENST00000560243 MYO10Q9HD67 2058 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 POLR2DO15514 142 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 RFPL2O75678 378 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 GCNT3O95395 438 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 CASP1P29466 404 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 ADSSP30520 456 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 ZBTB6Q15916 424 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 PSMD5Q16401 504 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 RESP18Q5W5W9 173 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 ATL3Q6DD88 541 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 LILRA6Q6PI73 481 aa12.69□□□□□ -0.38
RABGGTA-216ENST00000560243 RSPO2Q6UXX9 243 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms