RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 NRLP54845 237 aa21.86■■□□□ 1.09
RABGGTA-214ENST00000560163 SPEM2Q0P670 501 aa21.86■■□□□ 1.09
RABGGTA-214ENST00000560163 ST3GAL2Q16842 350 aa21.86■■□□□ 1.09
RABGGTA-214ENST00000560163 CDCA2Q69YH5 1023 aaPredicted RBP21.86■■□□□ 1.09
RABGGTA-214ENST00000560163 PIK3AP1Q6ZUJ8 805 aa21.86■■□□□ 1.09
RABGGTA-214ENST00000560163 CELF5Q8N6W0 485 aaKnown RBP21.86■■□□□ 1.09
RABGGTA-214ENST00000560163 PDZD7Q9H5P4 517 aa21.86■■□□□ 1.09
RABGGTA-214ENST00000560163 PRMT7Q9NVM4 692 aaPredicted RBP21.86■■□□□ 1.09
RABGGTA-214ENST00000560163 BACE2Q9Y5Z0 518 aa21.86■■□□□ 1.09
RABGGTA-214ENST00000560163 CDY1Q9Y6F8 540 aa21.86■■□□□ 1.09
RABGGTA-214ENST00000560163 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.86■■□□□ 1.09
RABGGTA-214ENST00000560163 COL4A2P08572 1712 aa21.86■■□□□ 1.09
RABGGTA-214ENST00000560163 NRG2O14511 850 aaPredicted RBP21.85■■□□□ 1.09
RABGGTA-214ENST00000560163 SLC30A4O14863 429 aa21.85■■□□□ 1.09
RABGGTA-214ENST00000560163 MARCH6O60337 910 aa21.85■■□□□ 1.09
RABGGTA-214ENST00000560163 RECQL4O94761 1208 aa21.85■■□□□ 1.09
RABGGTA-214ENST00000560163 BAG4O95429 457 aaKnown RBP21.85■■□□□ 1.09
RABGGTA-214ENST00000560163 CEBPBP17676 345 aa21.85■■□□□ 1.09
RABGGTA-214ENST00000560163 PRSS36Q5K4E3 855 aa21.85■■□□□ 1.09
RABGGTA-214ENST00000560163 LAIR1Q6GTX8 287 aa21.85■■□□□ 1.09
RABGGTA-214ENST00000560163 LARP6Q9BRS8 491 aaKnown RBP21.85■■□□□ 1.09
RABGGTA-214ENST00000560163 GPRC5CQ9NQ84 441 aa21.85■■□□□ 1.09
RABGGTA-214ENST00000560163 GJB4Q9NTQ9 266 aa21.85■■□□□ 1.09
RABGGTA-214ENST00000560163 A0A087WWV3 80 aa21.84■■□□□ 1.09
RABGGTA-214ENST00000560163 ARHGEF37A1IGU5 675 aa21.84■■□□□ 1.09
RABGGTA-214ENST00000560163 MAN2B1O00754 1011 aa21.84■■□□□ 1.09
RABGGTA-214ENST00000560163 LRP3O75074 770 aa21.84■■□□□ 1.09
RABGGTA-214ENST00000560163 RBM25P49756 843 aaKnown RBP21.84■■□□□ 1.09
RABGGTA-214ENST00000560163 NETO1Q8TDF5 533 aa21.84■■□□□ 1.09
RABGGTA-214ENST00000560163 PIGOQ8TEQ8 1089 aa21.84■■□□□ 1.09
RABGGTA-214ENST00000560163 IER2Q9BTL4 223 aa21.84■■□□□ 1.09
RABGGTA-214ENST00000560163 TRPV5Q9NQA5 729 aa21.84■■□□□ 1.09
RABGGTA-214ENST00000560163 PCDHA12Q9UN75 941 aa21.84■■□□□ 1.09
RABGGTA-214ENST00000560163 LRRIQ4A6NIV6 560 aa21.83■■□□□ 1.09
RABGGTA-214ENST00000560163 N4BP3O15049 544 aa21.83■■□□□ 1.09
RABGGTA-214ENST00000560163 RETP07949 1114 aa21.83■■□□□ 1.09
RABGGTA-214ENST00000560163 XRCC6P12956 609 aaKnown RBP eCLIP21.83■■□□□ 1.09
RABGGTA-214ENST00000560163 PTPN2P17706 415 aa21.83■■□□□ 1.09
RABGGTA-214ENST00000560163 LPAL2Q16609 132 aa21.83■■□□□ 1.09
RABGGTA-214ENST00000560163 PPM1JQ5JR12 505 aa21.83■■□□□ 1.09
RABGGTA-214ENST00000560163 MAP4K3Q8IVH8 894 aa21.83■■□□□ 1.09
RABGGTA-214ENST00000560163 NOSTRINQ8IVI9 506 aa21.83■■□□□ 1.09
RABGGTA-214ENST00000560163 DDX27Q96GQ7 796 aaKnown RBP21.83■■□□□ 1.09
RABGGTA-214ENST00000560163 NDRG2Q9UN36 371 aaKnown RBP21.83■■□□□ 1.09
RABGGTA-214ENST00000560163 FAM205CA6NFA0 338 aa21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 MICAL2O94851 1124 aa21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 ABLIM3O94929 683 aa21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 EDN1P05305 212 aa21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 TKTP29401 623 aaKnown RBP21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 STK3Q13188 491 aa21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 UPP1Q16831 310 aa21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 FAM78AQ5JUQ0 283 aa21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 SLC8B1Q6J4K2 584 aa21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 CPLX2Q6PUV4 134 aaKnown RBP21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 ZNF461Q8TAF7 563 aa21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 PPP1R10Q96QC0 940 aaKnown RBP21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 RAB23Q9ULC3 237 aa21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 USP20Q9Y2K6 914 aa21.82■■□□□ 1.08
RABGGTA-214ENST00000560163 USO1O60763 962 aaKnown RBP21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 B3GAT3O94766 335 aa21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 CLCNKBP51801 687 aa21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 GRM2Q14416 872 aa21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 ANKS3Q6ZW76 656 aa21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 C3orf58Q8NDZ4 430 aa21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 TNFRSF25Q93038 417 aa21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 TCEAL4Q96EI5 215 aa21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 ASB16Q96NS5 453 aa21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 TRMT61BQ9BVS5 477 aaKnown RBP21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 CCDC113Q9H0I3 377 aa21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 BRD9Q9H8M2 597 aa21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 LMAN1LQ9HAT1 526 aa21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 ZFP14Q9HCL3 533 aa21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 ZNF334Q9HCZ1 680 aaPredicted RBP21.81■■□□□ 1.08
RABGGTA-214ENST00000560163 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 CCR2P41597 374 aa21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 CCR3P51677 355 aa21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 ROR1Q01973 937 aa21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 PRPF4BQ13523 1007 aaKnown RBP21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 GAS6Q14393 721 aa21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 PPP2R5DQ14738 602 aa21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 EEF1DP3Q658K8 133 aa21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 MAEAQ7L5Y9 396 aa21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 IRF7Q92985 503 aa21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 TTC12Q9H892 705 aaPredicted RBP21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 SEMA4GQ9NTN9 838 aa21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 FRYQ5TBA9 3013 aa21.8■■□□□ 1.08
RABGGTA-214ENST00000560163 TICRRQ7Z2Z1 1910 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 WDR27A2RRH5 827 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 ACKR2O00590 384 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 HRO43593 1189 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 SPATA31C1P0DKV0 1188 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 CHRNB1P11230 501 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 ATF2P15336 505 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 CSRP2Q16527 193 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 VITQ6UXI7 678 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 ZBTB8OSQ8IWT0 167 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 TCEAL8Q8IYN2 117 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 BSNDQ8WZ55 320 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 FAM3CQ92520 227 aa21.79■■□□□ 1.08
RABGGTA-214ENST00000560163 ZSWIM3Q96MP5 696 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms