RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 KDM4CQ9H3R0 1056 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 XPNPEP1Q9NQW7 623 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 CYP26B1Q9NR63 512 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 AGPAT5Q9NUQ2 364 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 MARCH5Q9NX47 278 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 DDX25Q9UHL0 483 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 TCEAL9Q9UHQ7 104 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 PIN4Q9Y237 131 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 PCDHB2Q9Y5E7 798 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 OAS3Q9Y6K5 1087 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.48□□□□□ -1.37
USP3-215ENST00000559771 H0Y858 1186 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 INPPL1O15357 1258 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 PAPLNO95428 1278 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 CNPP09543 421 aaKnown RBP6.48□□□□□ -1.37
USP3-215ENST00000559771 SRGAP2BP0DMP2 458 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 FDPSP14324 419 aaKnown RBP6.48□□□□□ -1.37
USP3-215ENST00000559771 NPR3P17342 541 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 SFPQP23246 707 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP3-215ENST00000559771 PSMA5P28066 241 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 ADH6P28332 368 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 MTHFRP42898 656 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 QARSP47897 775 aaKnown RBP6.48□□□□□ -1.37
USP3-215ENST00000559771 CLCN4P51793 760 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 CDC42EP1Q00587 391 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 LAMTOR4Q0VGL1 99 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 STK3Q13188 491 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 NONOQ15233 471 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP3-215ENST00000559771 LETM2Q2VYF4 491 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 CWF19L1Q69YN2 538 aaKnown RBP6.48□□□□□ -1.37
USP3-215ENST00000559771 PPP4R3AQ6IN85 833 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 GALNT17Q6IS24 598 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 GLB1LQ6UWU2 654 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 TMC5Q6UXY8 1006 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 CATSPER4Q7RTX7 472 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 GPR149Q86SP6 731 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 ZDHHC14Q8IZN3 488 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 FAM177A1Q8N128 213 aaPredicted RBP6.48□□□□□ -1.37
USP3-215ENST00000559771 GSTCDQ8NEC7 633 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 SCLT1Q96NL6 688 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 NECTIN4Q96NY8 510 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 KLHL5Q96PQ7 755 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 PRRX2Q99811 253 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 EIF2AQ9BY44 585 aaKnown RBP6.48□□□□□ -1.37
USP3-215ENST00000559771 C22orf23Q9BZE7 217 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 DNAAF2Q9NVR5 837 aaKnown RBP6.48□□□□□ -1.37
USP3-215ENST00000559771 MIOSQ9NXC5 875 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 RGL1Q9NZL6 768 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 LIMD1Q9UGP4 676 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 TPCN1Q9ULQ1 816 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 SORCS3Q9UPU3 1222 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 INPP5FQ9Y2H2 1132 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 NR2E1Q9Y466 385 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 COL4A3BPQ9Y5P4 624 aa6.48□□□□□ -1.37
USP3-215ENST00000559771 TDRD15B5MCY1 1934 aaKnown RBP6.48□□□□□ -1.37
USP3-215ENST00000559771 WDR87Q6ZQQ6 2873 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 ZFHX2Q9C0A1 2572 aaPredicted RBP6.47□□□□□ -1.37
USP3-215ENST00000559771 MTCL1Q9Y4B5 1905 aaKnown RBP6.47□□□□□ -1.37
USP3-215ENST00000559771 A0A1B0GTH6 734 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 PROB1E7EW31 1015 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 NRP1O14786 923 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 EPB41L2O43491 1005 aaKnown RBP6.47□□□□□ -1.37
USP3-215ENST00000559771 PI15O43692 258 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 TSPAN1O60635 241 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 SLITRK3O94933 977 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 REC8O95072 547 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 POMCP01189 267 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 SSBP05455 408 aaKnown RBP eCLIP6.47□□□□□ -1.37
USP3-215ENST00000559771 P4HBP07237 508 aaKnown RBP6.47□□□□□ -1.37
USP3-215ENST00000559771 SRGAP2CP0DJJ0 459 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 SKIP12755 728 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 NCLP19338 710 aaKnown RBP6.47□□□□□ -1.37
USP3-215ENST00000559771 YWHABP31946 246 aaKnown RBP6.47□□□□□ -1.37
USP3-215ENST00000559771 DNM2P50570 870 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 RAB27AP51159 221 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 DSC1Q08554 894 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 MTMR3Q13615 1198 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 GIT2Q14161 759 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 CTTNQ14247 550 aaKnown RBP6.47□□□□□ -1.37
USP3-215ENST00000559771 EPHA7Q15375 998 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 AMHR2Q16671 573 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 KIAA0319Q5VV43 1072 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 CES5AQ6NT32 575 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 PIK3AP1Q6ZUJ8 805 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 ASCL5Q7RTU5 278 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 KRT25Q7Z3Z0 450 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 SRGAP1Q7Z6B7 1085 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 NEK8Q86SG6 692 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 FERMT3Q86UX7 667 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 C4orf19Q8IY42 314 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 COLGALT2Q8IYK4 626 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 UBALD2Q8IYN6 164 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 ASAP3Q8TDY4 903 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 RSPH1Q8WYR4 309 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 DYDC2Q96IM9 177 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 CEP170P1Q96L14 293 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 FAM20AQ96MK3 541 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 IPO9Q96P70 1041 aaKnown RBP6.47□□□□□ -1.37
USP3-215ENST00000559771 HSD17B14Q9BPX1 270 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 LXNQ9BS40 222 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms