RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 MYMKA6NI61 221 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 LOC730098B7Z3J9 87 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 PPP6R2O75170 966 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 GLUD1P00367 558 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 WEE2P0C1S8 567 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 ABCD1P33897 745 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 CLCNKBP51801 687 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 ELAVL2Q12926 359 aaKnown RBP13.75□□□□□ -0.21
LRRC28-214ENST00000559433 PKP1Q13835 747 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 XKR4Q5GH76 650 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 RTP2Q5QGT7 225 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 FAM171A1Q5VUB5 890 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 KANK3Q6NY19 840 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 PRSS55Q6UWB4 352 aaPredicted RBP13.75□□□□□ -0.21
LRRC28-214ENST00000559433 SFR1Q86XK3 245 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 CEP57Q86XR8 500 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 GLYCTKQ8IVS8 523 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 PDILTQ8N807 584 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 FIZ1Q96SL8 496 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 TTPALQ9BTX7 342 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 MAN1C1Q9NR34 630 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.75□□□□□ -0.21
LRRC28-214ENST00000559433 SLC38A7Q9NVC3 462 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 CNTN3Q9P232 1028 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 MUTYHQ9UIF7 546 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 HCN4Q9Y3Q4 1203 aa13.75□□□□□ -0.21
LRRC28-214ENST00000559433 ANK1P16157 1881 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 TMEM189-UBE2V1I3L0A0 370 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 MEFVO15553 781 aaPredicted RBP13.74□□□□□ -0.21
LRRC28-214ENST00000559433 B3GAT3O94766 335 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 PIGRP01833 764 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 CXCL8P10145 99 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 KCNE1P15382 129 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 GAP43P17677 238 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 RPL17P18621 184 aaKnown RBP13.74□□□□□ -0.21
LRRC28-214ENST00000559433 SP100P23497 879 aaPredicted RBP13.74□□□□□ -0.21
LRRC28-214ENST00000559433 GTF2BQ00403 316 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 SOX4Q06945 474 aaPredicted RBP13.74□□□□□ -0.21
LRRC28-214ENST00000559433 UPP1Q16831 310 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 ZC2HC1CQ53FD0 456 aaPredicted RBP13.74□□□□□ -0.21
LRRC28-214ENST00000559433 DCLRE1AQ6PJP8 1040 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 TMC5Q6UXY8 1006 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 PALB2Q86YC2 1186 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 MAP4K3Q8IVH8 894 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 GPR65Q8IYL9 337 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 ZMAT2Q96NC0 199 aaKnown RBP13.74□□□□□ -0.21
LRRC28-214ENST00000559433 HAPLN2Q9GZV7 340 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 POMKQ9H5K3 350 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 FNIP2Q9P278 1114 aa13.74□□□□□ -0.21
LRRC28-214ENST00000559433 PODXLO00592 558 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 TRAPPC3O43617 180 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 CUTAO60888 179 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 CLTAP09496 248 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 MYBP10242 640 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 IDEP14735 1019 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 IGFBP6P24592 240 aaPredicted RBP13.73□□□□□ -0.21
LRRC28-214ENST00000559433 PSMD5Q16401 504 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 KYAT1Q16773 422 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 SLC10A6Q3KNW5 377 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 HERC4Q5GLZ8 1057 aaPredicted RBP13.73□□□□□ -0.21
LRRC28-214ENST00000559433 PDXDC1Q6P996 788 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
LRRC28-214ENST00000559433 C3orf58Q8NDZ4 430 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 KCNG4Q8TDN1 519 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 C18orf25Q96B23 403 aaPredicted RBP13.73□□□□□ -0.21
LRRC28-214ENST00000559433 DNAJC19Q96DA6 116 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 DDX27Q96GQ7 796 aaKnown RBP13.73□□□□□ -0.21
LRRC28-214ENST00000559433 MSTO1Q9BUK6 570 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 MRPL44Q9H9J2 332 aaKnown RBP13.73□□□□□ -0.21
LRRC28-214ENST00000559433 TBC1D7Q9P0N9 293 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 SEL1LQ9UBV2 794 aa13.73□□□□□ -0.21
LRRC28-214ENST00000559433 PRR33A8MZF0 331 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 I3L4J1 428 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 OGTO15294 1046 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 TGM5O43548 720 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 SPATA31D3P0C874 917 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 TNFSF9P41273 254 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 ME1P48163 572 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 DNM1Q05193 864 aaKnown RBP13.72□□□□□ -0.21
LRRC28-214ENST00000559433 PPP2R3AQ06190 1150 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 ZBTB41Q5SVQ8 909 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 ATL3Q6DD88 541 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 SLC39A4Q6P5W5 647 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 SHC4Q6S5L8 630 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 CD300LGQ6UXG3 332 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 SPATA31D4Q6ZUB0 917 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 ZNF720Q7Z2F6 126 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 PIK3R5Q8WYR1 880 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 EDAQ92838 391 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 DHX58Q96C10 678 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 ACSF2Q96CM8 615 aaPredicted RBP13.72□□□□□ -0.21
LRRC28-214ENST00000559433 HVCN1Q96D96 273 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 ST6GALNAC4Q9H4F1 302 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 PLEKHA5Q9HAU0 1116 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 TUBGCP4Q9UGJ1 667 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 CFAP45Q9UL16 551 aa13.72□□□□□ -0.21
LRRC28-214ENST00000559433 TCHHQ07283 1943 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 A0A0B4J269 797 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms