RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 C9orf131Q5VYM1 1079 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 CDCA2Q69YH5 1023 aaPredicted RBP12.09□□□□□ -0.47
CLPX-204ENST00000559152 EEPD1Q7L9B9 569 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 WDR49Q8IV35 697 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 EFCAB13Q8IY85 973 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 SEC14L1Q92503 715 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 PI4K2AQ9BTU6 479 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 CNOT8Q9UFF9 292 aaKnown RBP12.09□□□□□ -0.47
CLPX-204ENST00000559152 AMACRQ9UHK6 382 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 RASAL2Q9UJF2 1139 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 MTUS1Q9ULD2 1270 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 IGKV6-21A0A0C4DH24 114 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 GOLGA6CA6NDK9 693 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 ASAP2O43150 1006 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 GOLGA6DP0CG33 693 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 UNGP13051 313 aaPredicted RBP12.09□□□□□ -0.47
CLPX-204ENST00000559152 EPHX2P34913 555 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 CTNNA1P35221 906 aaKnown RBP12.09□□□□□ -0.47
CLPX-204ENST00000559152 HSPA9P38646 679 aaKnown RBP12.09□□□□□ -0.47
CLPX-204ENST00000559152 GYS2P54840 703 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 ERVK-9P63128 1117 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 SNAPC2Q13487 334 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 TTLL4Q14679 1199 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 DCAF12L1Q5VU92 463 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 BRSK2Q8IWQ3 736 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 CD302Q8IX05 232 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 FAM76AQ8TAV0 307 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 SPATA33Q96N06 139 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 TCHPQ9BT92 498 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 GOLGA6AQ9NYA3 693 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 PCDHA3Q9Y5H8 950 aa12.09□□□□□ -0.47
CLPX-204ENST00000559152 OTOFQ9HC10 1997 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 CNTNAP2Q9UHC6 1331 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 ZSCAN5CA6NGD5 496 aaPredicted RBP12.08□□□□□ -0.48
CLPX-204ENST00000559152 TMEM110-MUSTN1A8MSY1 372 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 HBP1O60381 514 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 ERLIN2O94905 339 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 PGK2P07205 417 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 ITGA4P13612 1032 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 CHRNA3P32297 505 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 SLC1A1P43005 524 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 NSFP46459 744 aaKnown RBP12.08□□□□□ -0.48
CLPX-204ENST00000559152 PEX5P50542 639 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 CCNA1P78396 465 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 DR1Q01658 176 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 LAMTOR4Q0VGL1 99 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 MTMR3Q13615 1198 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 LEKR1Q6ZMV7 388 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 IQCKQ8N0W5 287 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 C1orf131Q8NDD1 294 aaKnown RBP12.08□□□□□ -0.48
CLPX-204ENST00000559152 CD101Q93033 1021 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 VCPIP1Q96JH7 1222 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 ZBTB45Q96K62 511 aaPredicted RBP12.08□□□□□ -0.48
CLPX-204ENST00000559152 HAPLN2Q9GZV7 340 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 CCDC113Q9H0I3 377 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 TXNRD2Q9NNW7 524 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 CNTN6Q9UQ52 1028 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 POLR2AP24928 1970 aaKnown RBP12.08□□□□□ -0.48
CLPX-204ENST00000559152 DOCK5Q9H7D0 1870 aa12.08□□□□□ -0.48
CLPX-204ENST00000559152 MSCO60682 206 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 ARIH2O95376 493 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 CAPN2P17655 700 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 RWDD2BP57060 319 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 MOGSQ13724 837 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 HSDL1Q3SXM5 330 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 LIN9Q5TKA1 542 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 CCDC62Q6P9F0 684 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 TSEN2Q8NCE0 465 aaKnown RBP12.07□□□□□ -0.48
CLPX-204ENST00000559152 ALG3Q92685 438 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 FGD4Q96M96 766 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 MRPL47Q9HD33 250 aaKnown RBP12.07□□□□□ -0.48
CLPX-204ENST00000559152 ACP6Q9NPH0 428 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLPX-204ENST00000559152 PODXLO00592 558 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 OGTO15294 1046 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 PHF2O75151 1096 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 VNN1O95497 513 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 CYP1A1P04798 512 aaPredicted RBP12.07□□□□□ -0.48
CLPX-204ENST00000559152 PRKCBP05771 671 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 CLTAP09496 248 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 FAM153BP0C7A2 387 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 TXNP10599 105 aaKnown RBP12.07□□□□□ -0.48
CLPX-204ENST00000559152 ACO1P21399 889 aaKnown RBP12.07□□□□□ -0.48
CLPX-204ENST00000559152 MAPK4P31152 587 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 GUCY2FP51841 1108 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 DRG2P55039 364 aaKnown RBP12.07□□□□□ -0.48
CLPX-204ENST00000559152 POU5F1Q01860 360 aaKnown RBP12.07□□□□□ -0.48
CLPX-204ENST00000559152 CENPCQ03188 943 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 MCL1Q07820 350 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 NCOA4Q13772 614 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 PLCB4Q15147 1175 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 Q3C1V9 767 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 FAM153CQ494X1 144 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 SPDYCQ5MJ68 293 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 WDR78Q5VTH9 848 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 GPAT2Q6NUI2 795 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 LRIG3Q6UXM1 1119 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 MCOLN2Q8IZK6 566 aa12.07□□□□□ -0.48
CLPX-204ENST00000559152 RNF149Q8NC42 400 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms