RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 DERAQ9Y315 318 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 R3HCC1Q9Y3T6 440 aaKnown RBP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 SMIM28A0A1B0GU29 152 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 LRRIQ3A6PVS8 624 aaPredicted RBP7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 PTGESO14684 152 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 INPPL1O15357 1258 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 TLL1O43897 1013 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 DGKIO75912 1065 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 POMCP01189 267 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 AFPP02771 609 aaKnown RBP7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 THP07101 528 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 NFICP08651 508 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 TRIM49P0CI25 452 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 TRIM49CP0CI26 452 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 PRKCSHP14314 528 aaPredicted RBP7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 KCNE1P15382 129 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 BMP8BP34820 402 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 MXI1P50539 228 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 AP3M2P53677 418 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 MARSP56192 900 aaKnown RBP7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 ENPEPQ07075 957 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 BIRC3Q13489 604 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 BTG3Q14201 252 aaPredicted RBP7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 NCAPHQ15003 741 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 DUOXA2Q1HG44 320 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 XKR4Q5GH76 650 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 TCP11X2Q5H9J9 407 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 SPOUT1Q5T280 376 aaKnown RBP7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 RASIP1Q5U651 963 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 CDKAL1Q5VV42 579 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 ALKAL1Q6UXT8 129 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 CHRDL2Q6WN34 429 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 TRIM59Q8IWR1 403 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 EFCAB13Q8IY85 973 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 CMTR2Q8IYT2 770 aaKnown RBP7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 TDHQ8IZJ6 230 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 PARD3BQ8TEW8 1205 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 CASD1Q96PB1 797 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 RAD9AQ99638 391 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 MTMR12Q9C0I1 747 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 RNF19AQ9NV58 838 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 TBC1D13Q9NVG8 400 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 INTS13Q9NVM9 706 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 C2CD2Q9Y426 696 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 INSL6Q9Y581 213 aa7.14□□□□□ -1.27
CHRNA3-204ENST00000559002 MICAL3Q7RTP6 2002 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 RANBP2P49792 3224 aaKnown RBP7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 MEFVO15553 781 aaPredicted RBP7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 N4BP1O75113 896 aaKnown RBP7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 ZC3H11AO75152 810 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 PHACTR2O75167 634 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 SERPINC1P01008 464 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 KRT19P08727 400 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 ZNF18P17022 549 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 CYP3A5P20815 502 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 GTF2H1P32780 548 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 GCLMP48507 274 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 AFF1P51825 1210 aaKnown RBP7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 WNT7BP56706 349 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 DLG4P78352 724 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 HTRA4P83105 476 aaPredicted RBP7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 MYL7Q01449 175 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 CETN1Q12798 172 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 TUSC3Q13454 348 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 TRPC3Q13507 836 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 KRT31Q15323 416 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 MAN2A1Q16706 1144 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 POTEHQ6S545 545 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 IRF2BP1Q8IU81 584 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 CRIPAKQ8N1N5 446 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 FIBCD1Q8N539 461 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 PLEKHO2Q8TD55 490 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 SLC35C1Q96A29 364 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 C18orf25Q96B23 403 aaPredicted RBP7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 BORCS6Q96GS4 357 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 UROC1Q96N76 676 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 ZMAT2Q96NC0 199 aaKnown RBP7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 PPP1R10Q96QC0 940 aaKnown RBP7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 POP1Q99575 1024 aaKnown RBP7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 TUBGCP2Q9BSJ2 902 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 RBSNQ9H1K0 784 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 CXCL16Q9H2A7 254 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 RC3H2Q9HBD1 1191 aaKnown RBP7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 TMEM8AQ9HCN3 771 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 MIOSQ9NXC5 875 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 DPP3Q9NY33 737 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 TAB2Q9NYJ8 693 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 TUBGCP4Q9UGJ1 667 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 ITGA11Q9UKX5 1188 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 PLAGL2Q9UPG8 496 aa7.13□□□□□ -1.27
CHRNA3-204ENST00000559002 TTC3P53804 2025 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 PTPRJQ12913 1337 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 CARNS1A5YM72 827 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 CASTOR2A6NHX0 329 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 PODXLO00592 558 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 ITGB3P05106 788 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms