RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	GLB1L	Q6UWU2	654 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	AGMO	Q6ZNB7	445 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	C4orf19	Q8IY42	314 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	DIS3L2	Q8IYB7	885 aa	Known RBP	7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	VPS52	Q8N1B4	723 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	RNF149	Q8NC42	400 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	PSPC1	Q8WXF1	523 aa	Known RBP	7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	SUSD6	Q92537	303 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	WASF1	Q92558	559 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	CPB2	Q96IY4	423 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	CDCA3	Q99618	268 aa	Predicted RBP	7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	EIF2AK1	Q9BQI3	630 aa	Known RBP	7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	PHF7	Q9BWX1	381 aa	Predicted RBP	7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	VN1R3	Q9BXE9	311 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	EIF2A	Q9BY44	585 aa	Known RBP	7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	INO80B	Q9C086	356 aa	Predicted RBP	7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	ZSWIM4	Q9H7M6	989 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	NGRN	Q9NPE2	291 aa	Known RBP	7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	XPNPEP1	Q9NQW7	623 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	AGPAT5	Q9NUQ2	364 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	TBC1D13	Q9NVG8	400 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	PCDHA12	Q9UN75	941 aa		7.79	□□□□□ -1.16
MARK3-215	ENST00000558787	TECTA	O75443	2155 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	KRBA1	A5PL33	1030 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	DKC1	O60832	514 aa	Known RBP eCLIP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	ZNF623	O75123	536 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	BAG4	O95429	457 aa	Known RBP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	POMC	P01189	267 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	ITGB2	P05107	769 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	GALT	P07902	379 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	MYB	P10242	640 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	EPCAM	P16422	314 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	ADH6	P28332	368 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	NCOA4	Q13772	614 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	SMC1A	Q14683	1233 aa	Known RBP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	CBX2	Q14781	532 aa	Predicted RBP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	CALCRL	Q16602	461 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	LINC00114	Q6XXX2	140 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	TMEM184A	Q6ZMB5	413 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	MAEA	Q7L5Y9	396 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	OTUD6A	Q7L8S5	288 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	MRPL10	Q7Z7H8	261 aa	Known RBP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	FERMT3	Q86UX7	667 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	CDR2L	Q86X02	465 aa	Predicted RBP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	SLFN12	Q8IYM2	578 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	ZNF295-AS1	Q8N0V1	137 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	SMG8	Q8ND04	991 aa	Known RBP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	ASAP3	Q8TDY4	903 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	PIGO	Q8TEQ8	1089 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	EDA	Q92838	391 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	TMEM169	Q96HH4	297 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	IGSF21	Q96ID5	467 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	HSD17B14	Q9BPX1	270 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	JPH2	Q9BR39	696 aa	Predicted RBP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	TRAIP	Q9BWF2	469 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	APOL6	Q9BWW8	343 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	MRPL9	Q9BYD2	267 aa	Known RBP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	TMEM60	Q9H2L4	133 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	TTC12	Q9H892	705 aa	Predicted RBP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	BRMS1	Q9HCU9	246 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	AVEN	Q9NQS1	362 aa	Predicted RBP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	SCHIP1	Q9P0W5	487 aa	Predicted RBP	7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	HES2	Q9Y543	173 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	HCFC2	Q9Y5Z7	792 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	USP3	Q9Y6I4	520 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	ZDBF2	Q9HCK1	2354 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	WDFY4	Q6ZS81	3184 aa		7.78	□□□□□ -1.16
MARK3-215	ENST00000558787	TMEM221	A6NGB7	291 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787		F8W810	466 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	INO80B-WBP1	J3KQ70	363 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787		M0R296	226 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	GNB5	O14775	395 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	B4GALT5	O43286	388 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	TSPAN1	O60635	241 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	CD33	P20138	364 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	MCM7	P33993	719 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	RAB27A	P51159	221 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	ZXDA	P98168	799 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	CAPS	Q13938	189 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	ZNF174	Q15697	407 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	RARS2	Q5T160	578 aa	Known RBP	7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	TAS1R1	Q7RTX1	841 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	SRGAP1	Q7Z6B7	1085 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	DDX53	Q86TM3	631 aa	Known RBP	7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	CCDC83	Q8IWF9	413 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	SLC22A17	Q8WUG5	538 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	TCP11	Q8WWU5	503 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	PGBD4	Q96DM1	585 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	FBXL18	Q96ME1	805 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	MTMR9	Q96QG7	549 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	NAP1L4	Q99733	375 aa	Known RBP	7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	ZBP1	Q9H171	429 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	SMOC2	Q9H3U7	446 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	RSAD1	Q9HA92	442 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	POLD4	Q9HCU8	107 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	NEUROD4	Q9HD90	331 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	GPRC5C	Q9NQ84	441 aa		7.77	□□□□□ -1.17
MARK3-215	ENST00000558787	MIOS	Q9NXC5	875 aa		7.77	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms