RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 GNA11P29992 359 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 OR1D2P34982 312 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 NPEPPSP55786 919 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 PSMC5P62195 406 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 GRIK3Q13003 919 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 RAB33AQ14088 237 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 PCBP1Q15365 356 aaKnown RBP eCLIP7.52□□□□□ -1.21
LRRC28-207ENST00000558500 CCDC6Q16204 474 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 FAM78AQ5JUQ0 283 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 TTC22Q5TAA0 569 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 FAM171A1Q5VUB5 890 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 PLA2G4FQ68DD2 849 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 HEATR6Q6AI08 1181 aaKnown RBP7.52□□□□□ -1.21
LRRC28-207ENST00000558500 PSAPL1Q6NUJ1 521 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 PDXDC1Q6P996 788 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 CEP57Q86XR8 500 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 MAP4K3Q8IVH8 894 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 EXOC8Q8IYI6 725 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 HACE1Q8IYU2 909 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 RNF149Q8NC42 400 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 HASPINQ8TF76 798 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 CCDC12Q8WUD4 166 aaPredicted RBP7.52□□□□□ -1.21
LRRC28-207ENST00000558500 PSPC1Q8WXF1 523 aaKnown RBP7.52□□□□□ -1.21
LRRC28-207ENST00000558500 TMEM143Q96AN5 459 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 LOXL4Q96JB6 756 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 PAAF1Q9BRP4 392 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 TMUB1Q9BVT8 246 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 NXF3Q9H4D5 531 aaKnown RBP7.52□□□□□ -1.21
LRRC28-207ENST00000558500 DHX33Q9H6R0 707 aaKnown RBP7.52□□□□□ -1.21
LRRC28-207ENST00000558500 ZFP14Q9HCL3 533 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 ZNF334Q9HCZ1 680 aaPredicted RBP7.52□□□□□ -1.21
LRRC28-207ENST00000558500 CACNG4Q9UBN1 327 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 BRPF3Q9ULD4 1205 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 WASF3Q9UPY6 502 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 ITPR1Q14643 2758 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 MIA3Q5JRA6 1907 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 ZMYM2Q9UBW7 1377 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 GOLGA8AA7E2F4 631 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 GOLGA8BA8MQT2 603 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 NRG2O14511 850 aaPredicted RBP7.51□□□□□ -1.21
LRRC28-207ENST00000558500 SLC27A2O14975 620 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 ASAP2O43150 1006 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 EPN2O95208 641 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 KIF4AO95239 1232 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 PTPN2P17706 415 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 PSMC3P17980 439 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 CCNE1P24864 410 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 CDC27P30260 824 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 GDI1P31150 447 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 HOXA6P31267 233 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 RFC5P40937 340 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 USP11P51784 963 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 MLLT6P55198 1093 aaPredicted RBP7.51□□□□□ -1.21
LRRC28-207ENST00000558500 RING1Q06587 406 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 NCBP1Q09161 790 aaKnown RBP7.51□□□□□ -1.21
LRRC28-207ENST00000558500 TUSC3Q13454 348 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 AAMPQ13685 434 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 LRRC32Q14392 662 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 PLA2G2CQ5R387 149 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 FERMT3Q86UX7 667 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 WDR5BQ86VZ2 330 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 BICD2Q8TD16 824 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 ZDHHC16Q969W1 377 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 CPB2Q96IY4 423 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 TRIM6Q9C030 488 aaPredicted RBP7.51□□□□□ -1.21
LRRC28-207ENST00000558500 RBM12Q9NTZ6 932 aaKnown RBP7.51□□□□□ -1.21
LRRC28-207ENST00000558500 PPME1Q9Y570 386 aa7.51□□□□□ -1.21
LRRC28-207ENST00000558500 DSPP15924 2871 aaKnown RBP7.51□□□□□ -1.21
LRRC28-207ENST00000558500 CASTOR2A6NHX0 329 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 INO80B-WBP1J3KQ70 363 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 ARHGAP33O14559 1287 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 ZNF263O14978 683 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 MICAL2O94851 1124 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 SPINK2P20155 84 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 HOXC13P31276 330 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 ADD1P35611 737 aaKnown RBP7.5□□□□□ -1.21
LRRC28-207ENST00000558500 RAP1GAPP47736 663 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 NOVA1P51513 510 aaKnown RBP7.5□□□□□ -1.21
LRRC28-207ENST00000558500 PTENP60484 403 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 SPIRE1Q08AE8 756 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 ELAVL2Q12926 359 aaKnown RBP7.5□□□□□ -1.21
LRRC28-207ENST00000558500 FOXC1Q12948 553 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 Q4G0T1 1027 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 WDR44Q5JSH3 913 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 PRSS36Q5K4E3 855 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 CREB3L3Q68CJ9 461 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 RNF43Q68DV7 783 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 SLC27A1Q6PCB7 646 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 VITQ6UXI7 678 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-207ENST00000558500 Q6ZS52 159 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 CACNA2D4Q7Z3S7 1137 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 DEPDC1BQ8WUY9 529 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 TCP11Q8WWU5 503 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 GATA6Q92908 595 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 SMARCD2Q92925 531 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 TCEAL4Q96EI5 215 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 MSANTD3Q96H12 275 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 CEP170P1Q96L14 293 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 ASB16Q96NS5 453 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms