RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 PNMA2Q9UL42 364 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 MEIS3P2A8K0S8 358 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 RANBP6O60518 1105 aaKnown RBP7.04□□□□□ -1.28
ZEB1-211ENST00000558440 NMT2O60551 498 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 EFCAB14O75071 495 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 GJB5O95377 273 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 SLC16A2P36021 539 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 CCNFP41002 786 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 ERVK-21P61565 698 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 DEFB103AP81534 67 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 LEXMQ3ZCV2 418 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 SYDE2Q5VT97 1194 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 TSHZ3Q63HK5 1081 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 RNF111Q6ZNA4 994 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 GK5Q6ZS86 529 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 LRRC8DQ7L1W4 858 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 RASGRP2Q7LDG7 609 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 NLRC3Q7RTR2 1065 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 TMCO2Q7Z6W1 182 aaPredicted RBP7.04□□□□□ -1.28
ZEB1-211ENST00000558440 C1QL4Q86Z23 238 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 SPPL2CQ8IUH8 684 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 FAM178BQ8IXR5 827 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 DNERQ8NFT8 737 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 LINC01599Q8WXQ3 324 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 COPS5Q92905 334 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 G6PC3Q9BUM1 346 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 SLC6A17Q9H1V8 727 aa7.04□□□□□ -1.28
ZEB1-211ENST00000558440 DOCK5Q9H7D0 1870 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.03□□□□□ -1.28
ZEB1-211ENST00000558440 ABHD14A-ACY1A0A1B0GW23 586 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 LINC01553A4QN01 128 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 CXCL10P02778 98 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 MED14OSP0DP75 135 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 IL9P15248 144 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 ZNF16P17020 682 aaPredicted RBP7.03□□□□□ -1.28
ZEB1-211ENST00000558440 CASTP20810 708 aaKnown RBP7.03□□□□□ -1.28
ZEB1-211ENST00000558440 CFPP27918 469 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 MCM4P33991 863 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 ZNF165P49910 485 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 MRE11P49959 708 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 RPS6P62753 249 aaKnown RBP7.03□□□□□ -1.28
ZEB1-211ENST00000558440 PTPROQ16827 1216 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 BTNL9Q6UXG8 535 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 TMC3Q7Z5M5 1100 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 SESTD1Q86VW0 696 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 IRF2BP1Q8IU81 584 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 SLITRK4Q8IW52 837 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 C7orf31Q8N865 590 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 NKD1Q969G9 470 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 TCTN2Q96GX1 697 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 SEC62Q99442 399 aaKnown RBP7.03□□□□□ -1.28
ZEB1-211ENST00000558440 FSD1Q9BTV5 496 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 IL17RBQ9NRM6 502 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 TOMM22Q9NS69 142 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 CTNNA3Q9UI47 895 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 FAM50BQ9Y247 325 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.03□□□□□ -1.28
ZEB1-211ENST00000558440 LOXHD1Q8IVV2 1947 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 CACNA1HO95180 2353 aa7.03□□□□□ -1.28
ZEB1-211ENST00000558440 ZFHX2Q9C0A1 2572 aaPredicted RBP7.03□□□□□ -1.28
ZEB1-211ENST00000558440 FRMPD2Q68DX3 1309 aaPredicted RBP7.02□□□□□ -1.28
ZEB1-211ENST00000558440 VPS13AQ96RL7 3174 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 TECTAO75443 2155 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 DCXO43602 365 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 NBNO60934 754 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 CLEC3AO75596 197 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 ARIH2O95376 493 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 GH1P01241 217 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 AMHP03971 560 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 MMP3P08254 477 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 TMEM253P0C7T8 217 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 TOP1P11387 765 aaKnown RBP7.02□□□□□ -1.29
ZEB1-211ENST00000558440 CKBP12277 381 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 NME1P15531 152 aaKnown RBP7.02□□□□□ -1.29
ZEB1-211ENST00000558440 GLDCP23378 1020 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 EDNRBP24530 442 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 RBL2Q08999 1139 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 SNW1Q13573 536 aaKnown RBP7.02□□□□□ -1.29
ZEB1-211ENST00000558440 DGKDQ16760 1214 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 EP400NLQ6ZTU2 488 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 SEPT14Q6ZU15 432 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 CHST3Q7LGC8 479 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 LRRC56Q8IYG6 542 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-211ENST00000558440 ZNF655Q8N720 491 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-211ENST00000558440 TMEM87AQ8NBN3 555 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-211ENST00000558440 AFG1LQ8WV93 481 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 CLEC4DQ8WXI8 215 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 INTS4Q96HW7 963 aaKnown RBP7.02□□□□□ -1.29
ZEB1-211ENST00000558440 EAF1Q96JC9 268 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-211ENST00000558440 KATNAL1Q9BW62 490 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 KCNH6Q9H252 994 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 INCENPQ9NQS7 918 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 GPR160Q9UJ42 338 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 INSL6Q9Y581 213 aa7.02□□□□□ -1.29
ZEB1-211ENST00000558440 BAZ2BQ9UIF8 2168 aaKnown RBP7.02□□□□□ -1.29
ZEB1-211ENST00000558440 TTC41PQ6P2S7 1318 aa7.01□□□□□ -1.29
ZEB1-211ENST00000558440 EMSYQ7Z589 1322 aa7.01□□□□□ -1.29
ZEB1-211ENST00000558440 WDR19Q8NEZ3 1342 aa7.01□□□□□ -1.29
ZEB1-211ENST00000558440 LAMA4Q16363 1823 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms