RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 KHDC1Q4VXA5 237 aaKnown RBP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 SGO2Q562F6 1265 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 RFWD3Q6PCD5 774 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 PALB2Q86YC2 1186 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 VPS52Q8N1B4 723 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 PHC3Q8NDX5 983 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 BTBD6Q96KE9 485 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 C9orf72Q96LT7 481 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 ZSWIM1Q9BR11 485 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 SPZ1Q9BXG8 430 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 METTL14Q9HCE5 456 aaKnown RBP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 GPCPD1Q9NPB8 672 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 PCMTD2Q9NV79 361 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 CHCHD3Q9NX63 227 aaKnown RBP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 PCYOX1Q9UHG3 505 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 DCTN4Q9UJW0 460 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 NAALADL1Q9UQQ1 740 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 TLL2Q9Y6L7 1015 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 NCANO14594 1321 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 WDR91A4D1P6 747 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 ANKRD62A6NC57 917 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 FAM47DPA6NHR8 397 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 YDJCA8MPS7 323 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 USP17L5A8MUK1 530 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 MAP3K7O43318 606 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 TBCAO75347 108 aaKnown RBP5.39□□□□□ -1.55
HMG20A-204ENST00000558288 KRT36O76013 467 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 TTC4O95801 387 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 FTLP02792 175 aaPredicted RBP5.39□□□□□ -1.55
HMG20A-204ENST00000558288 ATF2P15336 505 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 RASA1P20936 1047 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 KLRK1P26718 216 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 GSTT1P30711 240 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 HOXA10P31260 410 aaPredicted RBP5.39□□□□□ -1.55
HMG20A-204ENST00000558288 JAM2P57087 298 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 ZBTB16Q05516 673 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 ACVR2BQ13705 512 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 CRY2Q49AN0 593 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 SBK1Q52WX2 424 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 C12orf60Q5U649 245 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 HHATQ5VTY9 493 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 MIGA2Q7L4E1 593 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 CYFIP1Q7L576 1253 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 HS2ST1Q7LGA3 356 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 PRUNE1Q86TP1 453 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 TRIM74Q86UV6 250 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 TRIM73Q86UV7 250 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 MAPKAPK5Q8IW41 473 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 RHOT2Q8IXI1 618 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 INPP5DQ92835 1189 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 ZNF333Q96JL9 665 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 FAM84BQ96KN1 310 aaPredicted RBP5.39□□□□□ -1.55
HMG20A-204ENST00000558288 NPHS2Q9NP85 383 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 SIX2Q9NPC8 291 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 UBN1Q9NPG3 1134 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 ANAPC5Q9UJX4 755 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 COL1A1P02452 1464 aaPredicted RBP5.39□□□□□ -1.55
HMG20A-204ENST00000558288 CASP8AP2Q9UKL3 1982 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 hCG_2014768A0A024R1R8 64 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 CFAP69A5D8W1 941 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 SFI1A8K8P3 1242 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 CLDN3O15551 220 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 CA12O43570 354 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 GSTA2P09210 222 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 PYGBP11216 843 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 ITGA8P53708 1063 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 SPARCL1Q14515 664 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 DLGAP5Q15398 846 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 ZC3H12AQ5D1E8 599 aaKnown RBP5.39□□□□□ -1.55
HMG20A-204ENST00000558288 TNFAIP8L3Q5GJ75 292 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 HP1BP3Q5SSJ5 553 aaPredicted RBP5.39□□□□□ -1.55
HMG20A-204ENST00000558288 FYB2Q5VWT5 728 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 OR52E8Q6IFG1 317 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 FOXR2Q6PJQ5 311 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 SLC13A5Q86YT5 568 aaPredicted RBP5.39□□□□□ -1.55
HMG20A-204ENST00000558288 FAM186BQ8IYM0 893 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 SYCP3Q8IZU3 236 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 C4orf33Q8N1A6 199 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 RDH13Q8NBN7 331 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 ATG4AQ8WYN0 398 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 SLC35C1Q96A29 364 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 SLC10A4Q96EP9 437 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 CDCA5Q96FF9 252 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 DYDC2Q96IM9 177 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 TRAPPC9Q96Q05 1148 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 UBE2OQ9C0C9 1292 aaKnown RBP5.39□□□□□ -1.55
HMG20A-204ENST00000558288 EXOC1LA0A1B0GW35 172 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 MAGEA13PA6NCF6 341 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 SMAPO00193 183 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 GYG2O15488 501 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 CDH16O75309 829 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 BAG3O95817 575 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 TRIM49P0CI25 452 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 TRIM49CP0CI26 452 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 CETPP11597 493 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 CA4P22748 312 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 CTNNA2P26232 953 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 PTPN4P29074 926 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 CYP2J2P51589 502 aa5.39□□□□□ -1.55
HMG20A-204ENST00000558288 YARSP54577 528 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms