RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TSPAN18Q96SJ8 248 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 MSTO1Q9BUK6 570 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 TMEM206Q9H813 350 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 MARCH5Q9NX47 278 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 CLDND1Q9NY35 253 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 CNTN3Q9P232 1028 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 LHX6Q9UPM6 363 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 IRAK3Q9Y616 596 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 A0A0B4J269 797 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 SMIM28A0A1B0GU29 152 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 CASTOR2A6NHX0 329 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 ACTN4O43707 911 aaKnown RBP13.62□□□□□ -0.23
SLIRP-211ENST00000557623 TADA2AO75478 443 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 SOD2P04179 222 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 SRGAP2BP0DMP2 458 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 MYBP10242 640 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 KCNE1P15382 129 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 CA8P35219 290 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 NAB2Q15742 525 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 DUSP6Q16828 381 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 CTC1Q2NKJ3 1217 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 TJAP1Q5JTD0 557 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 GLRA4Q5JXX5 417 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 EP400NLQ6ZTU2 488 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 RBM23Q86U06 439 aaKnown RBP13.62□□□□□ -0.23
SLIRP-211ENST00000557623 FSIP1Q8NA03 581 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 PAGE5Q96GU1 130 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 CCDC34Q96HJ3 373 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 ASB2Q96Q27 587 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 HERC2P3Q9BVR0 1158 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 HAPLN2Q9GZV7 340 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 RPF1Q9H9Y2 349 aaKnown RBP13.62□□□□□ -0.23
SLIRP-211ENST00000557623 ADAM28Q9UKQ2 775 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 PCDHGC5Q9Y5F6 944 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 STYXL1Q9Y6J8 313 aa13.62□□□□□ -0.23
SLIRP-211ENST00000557623 C2orf71A6NGG8 1288 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 HIDE1A8MVS5 230 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 ANKRD63C9JTQ0 380 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 DPYSL4O14531 572 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 EIF3DO15371 548 aaKnown RBP eCLIP13.61□□□□□ -0.23
SLIRP-211ENST00000557623 XPOTO43592 962 aaKnown RBP13.61□□□□□ -0.23
SLIRP-211ENST00000557623 URODP06132 367 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 KCNA5P22460 613 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 CASP5P51878 434 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 NDUFA8P51970 172 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 POU5F1Q01860 360 aaKnown RBP13.61□□□□□ -0.23
SLIRP-211ENST00000557623 PPP2R3AQ06190 1150 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 ELAVL2Q12926 359 aaKnown RBP13.61□□□□□ -0.23
SLIRP-211ENST00000557623 ADAM15Q13444 863 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 CUL4BQ13620 913 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 SLC10A6Q3KNW5 377 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 PUS10Q3MIT2 529 aaKnown RBP13.61□□□□□ -0.23
SLIRP-211ENST00000557623 LEXMQ3ZCV2 418 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 SEZ6Q53EL9 994 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 FAM26FQ5R3K3 315 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 FUT10Q6P4F1 479 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 SLC39A4Q6P5W5 647 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 CD302Q8IX05 232 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 RNF168Q8IYW5 571 aaPredicted RBP13.61□□□□□ -0.23
SLIRP-211ENST00000557623 POMGNT1Q8WZA1 660 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 VN1R3Q9BXE9 311 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 EMILIN2Q9BXX0 1053 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 CXCL16Q9H2A7 254 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 BLZF1Q9H2G9 400 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 MRPL17Q9NRX2 175 aaKnown RBP13.61□□□□□ -0.23
SLIRP-211ENST00000557623 AGO2Q9UKV8 859 aaKnown RBP13.61□□□□□ -0.23
SLIRP-211ENST00000557623 TCF20Q9UGU0 1960 aaKnown RBP13.61□□□□□ -0.23
SLIRP-211ENST00000557623 SF3B1O75533 1304 aaKnown RBP eCLIP13.61□□□□□ -0.23
SLIRP-211ENST00000557623 UBE4BO95155 1302 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 EYSQ5T1H1 3165 aa13.61□□□□□ -0.23
SLIRP-211ENST00000557623 MTCL1Q9Y4B5 1905 aaKnown RBP13.6□□□□□ -0.23
SLIRP-211ENST00000557623 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.6□□□□□ -0.23
SLIRP-211ENST00000557623 TTC26A0AVF1 554 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 TMEM189-UBE2V1I3L0A0 370 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 PER2O15055 1255 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 FAM189A1O60320 539 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 PRPF6O94906 941 aaKnown RBP13.6□□□□□ -0.23
SLIRP-211ENST00000557623 EFEMP2O95967 443 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 LDHAP00338 332 aaKnown RBP13.6□□□□□ -0.23
SLIRP-211ENST00000557623 CXCL8P10145 99 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 GARTP22102 1010 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 RPL9P32969 192 aaKnown RBP13.6□□□□□ -0.23
SLIRP-211ENST00000557623 GTF2F1P35269 517 aaKnown RBP eCLIP13.6□□□□□ -0.23
SLIRP-211ENST00000557623 GLUD2P49448 558 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 NDUFV1P49821 464 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 TFF2Q03403 129 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 EHHADHQ08426 723 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 KCNA1Q09470 495 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 USP41Q3LFD5 358 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 TPRNQ4KMQ1 711 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 KIAA1841Q6NSI8 718 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 KANK3Q6NY19 840 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 DCLRE1AQ6PJP8 1040 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 PPFIBP1Q86W92 1011 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 GPR65Q8IYL9 337 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 CCDC47Q96A33 483 aaKnown RBP13.6□□□□□ -0.23
SLIRP-211ENST00000557623 PAAF1Q9BRP4 392 aa13.6□□□□□ -0.23
SLIRP-211ENST00000557623 CHMP5Q9NZZ3 219 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms