RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 N4BP3O15049 544 aa20.27■□□□□ 0.84
ABCD4-228ENST00000557588 BAG4O95429 457 aaKnown RBP20.27■□□□□ 0.84
ABCD4-228ENST00000557588 FCARP24071 287 aa20.27■□□□□ 0.84
ABCD4-228ENST00000557588 LAIR1Q6GTX8 287 aa20.27■□□□□ 0.84
ABCD4-228ENST00000557588 POTEHQ6S545 545 aa20.27■□□□□ 0.84
ABCD4-228ENST00000557588 OXER1Q8TDS5 423 aa20.27■□□□□ 0.84
ABCD4-228ENST00000557588 CXCL16Q9H2A7 254 aa20.27■□□□□ 0.84
ABCD4-228ENST00000557588 SNTG2Q9NY99 539 aa20.27■□□□□ 0.84
ABCD4-228ENST00000557588 BACE2Q9Y5Z0 518 aa20.27■□□□□ 0.84
ABCD4-228ENST00000557588 CDY1Q9Y6F8 540 aa20.27■□□□□ 0.84
ABCD4-228ENST00000557588 TTLL13PA6NNM8 815 aa20.26■□□□□ 0.83
ABCD4-228ENST00000557588 USO1O60763 962 aaKnown RBP20.26■□□□□ 0.83
ABCD4-228ENST00000557588 CEBPBP17676 345 aa20.26■□□□□ 0.83
ABCD4-228ENST00000557588 RBM25P49756 843 aaKnown RBP20.26■□□□□ 0.83
ABCD4-228ENST00000557588 NRLP54845 237 aa20.26■□□□□ 0.83
ABCD4-228ENST00000557588 ST3GAL2Q16842 350 aa20.26■□□□□ 0.83
ABCD4-228ENST00000557588 EARS2Q5JPH6 523 aaKnown RBP20.26■□□□□ 0.83
ABCD4-228ENST00000557588 TANGO2Q6ICL3 276 aa20.26■□□□□ 0.83
ABCD4-228ENST00000557588 NETO1Q8TDF5 533 aa20.26■□□□□ 0.83
ABCD4-228ENST00000557588 MCRS1Q96EZ8 462 aa20.26■□□□□ 0.83
ABCD4-228ENST00000557588 GPRC5CQ9NQ84 441 aa20.26■□□□□ 0.83
ABCD4-228ENST00000557588 CHD6Q8TD26 2715 aa20.26■□□□□ 0.83
ABCD4-228ENST00000557588 ARHGEF37A1IGU5 675 aa20.25■□□□□ 0.83
ABCD4-228ENST00000557588 MAN2B1O00754 1011 aa20.25■□□□□ 0.83
ABCD4-228ENST00000557588 SLC30A4O14863 429 aa20.25■□□□□ 0.83
ABCD4-228ENST00000557588 LRP3O75074 770 aa20.25■□□□□ 0.83
ABCD4-228ENST00000557588 XBP1P17861 261 aa20.25■□□□□ 0.83
ABCD4-228ENST00000557588 PPP2R5DQ14738 602 aa20.25■□□□□ 0.83
ABCD4-228ENST00000557588 PRSS36Q5K4E3 855 aa20.25■□□□□ 0.83
ABCD4-228ENST00000557588 ZBTB8OSQ8IWT0 167 aa20.25■□□□□ 0.83
ABCD4-228ENST00000557588 CELF5Q8N6W0 485 aaKnown RBP20.25■□□□□ 0.83
ABCD4-228ENST00000557588 DDX27Q96GQ7 796 aaKnown RBP20.25■□□□□ 0.83
ABCD4-228ENST00000557588 RAB23Q9ULC3 237 aa20.25■□□□□ 0.83
ABCD4-228ENST00000557588 PCDHA12Q9UN75 941 aa20.25■□□□□ 0.83
ABCD4-228ENST00000557588 TICRRQ7Z2Z1 1910 aa20.25■□□□□ 0.83
ABCD4-228ENST00000557588 CDKL5O76039 1030 aa20.24■□□□□ 0.83
ABCD4-228ENST00000557588 SPEM2Q0P670 501 aa20.24■□□□□ 0.83
ABCD4-228ENST00000557588 STK3Q13188 491 aa20.24■□□□□ 0.83
ABCD4-228ENST00000557588 ANKS3Q6ZW76 656 aa20.24■□□□□ 0.83
ABCD4-228ENST00000557588 MCPH1Q8NEM0 835 aa20.24■□□□□ 0.83
ABCD4-228ENST00000557588 PIGOQ8TEQ8 1089 aa20.24■□□□□ 0.83
ABCD4-228ENST00000557588 C2orf40Q9H1Z8 148 aa20.24■□□□□ 0.83
ABCD4-228ENST00000557588 TRPV5Q9NQA5 729 aa20.24■□□□□ 0.83
ABCD4-228ENST00000557588 GJB4Q9NTQ9 266 aa20.24■□□□□ 0.83
ABCD4-228ENST00000557588 NDRG2Q9UN36 371 aaKnown RBP20.24■□□□□ 0.83
ABCD4-228ENST00000557588 CYP46A1Q9Y6A2 500 aa20.24■□□□□ 0.83
ABCD4-228ENST00000557588 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.24■□□□□ 0.83
ABCD4-228ENST00000557588 FAM205CA6NFA0 338 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 B3GAT3O94766 335 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 MICAL2O94851 1124 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 REC8O95072 547 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 RETP07949 1114 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 XRCC6P12956 609 aaKnown RBP eCLIP20.23■□□□□ 0.83
ABCD4-228ENST00000557588 IGFBP6P24592 240 aaPredicted RBP20.23■□□□□ 0.83
ABCD4-228ENST00000557588 TKTP29401 623 aaKnown RBP20.23■□□□□ 0.83
ABCD4-228ENST00000557588 CCR3P51677 355 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 ROR1Q01973 937 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 PRPF4BQ13523 1007 aaKnown RBP20.23■□□□□ 0.83
ABCD4-228ENST00000557588 GRM2Q14416 872 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 PPM1JQ5JR12 505 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 SLC8B1Q6J4K2 584 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 CD300LGQ6UXG3 332 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 CENPQQ7L2Z9 268 aaPredicted RBP20.23■□□□□ 0.83
ABCD4-228ENST00000557588 NOSTRINQ8IVI9 506 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 UROC1Q96N76 676 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 PPP1R10Q96QC0 940 aaKnown RBP20.23■□□□□ 0.83
ABCD4-228ENST00000557588 ADPGKQ9BRR6 497 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 LARP6Q9BRS8 491 aaKnown RBP20.23■□□□□ 0.83
ABCD4-228ENST00000557588 CCDC113Q9H0I3 377 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 BRD9Q9H8M2 597 aa20.23■□□□□ 0.83
ABCD4-228ENST00000557588 DAXXQ9UER7 740 aaPredicted RBP20.23■□□□□ 0.83
ABCD4-228ENST00000557588 LRG1P02750 347 aa20.22■□□□□ 0.83
ABCD4-228ENST00000557588 PTPN2P17706 415 aa20.22■□□□□ 0.83
ABCD4-228ENST00000557588 CLCNKBP51801 687 aa20.22■□□□□ 0.83
ABCD4-228ENST00000557588 CALCRLQ16602 461 aa20.22■□□□□ 0.83
ABCD4-228ENST00000557588 LPAL2Q16609 132 aa20.22■□□□□ 0.83
ABCD4-228ENST00000557588 MAPK6Q16659 721 aa20.22■□□□□ 0.83
ABCD4-228ENST00000557588 UPP1Q16831 310 aa20.22■□□□□ 0.83
ABCD4-228ENST00000557588 FAM78AQ5JUQ0 283 aa20.22■□□□□ 0.83
ABCD4-228ENST00000557588 ZNF461Q8TAF7 563 aa20.22■□□□□ 0.83
ABCD4-228ENST00000557588 TNFRSF25Q93038 417 aa20.22■□□□□ 0.83
ABCD4-228ENST00000557588 TRMT61BQ9BVS5 477 aaKnown RBP20.22■□□□□ 0.83
ABCD4-228ENST00000557588 TTC12Q9H892 705 aaPredicted RBP20.22■□□□□ 0.83
ABCD4-228ENST00000557588 ZFP14Q9HCL3 533 aa20.22■□□□□ 0.83
ABCD4-228ENST00000557588 ACKR2O00590 384 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 TRAPPC3O43617 180 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 ABLIM3O94929 683 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 EDN1P05305 212 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 PRKCBP05771 671 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 SCRN1Q12765 414 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 TMEM132AQ24JP5 1023 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 DCAF4L1Q3SXM0 396 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 GLRA4Q5JXX5 417 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 MAEAQ7L5Y9 396 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 MAP4K3Q8IVH8 894 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 C3orf58Q8NDZ4 430 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 BSNDQ8WZ55 320 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 IRF7Q92985 503 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 ASB16Q96NS5 453 aa20.21■□□□□ 0.83
ABCD4-228ENST00000557588 TM6SF1Q9BZW5 370 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms