RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ANKEF1Q9NU02 776 aa18.93■□□□□ 0.62
XRCC3-218ENST00000557439 UVRAGQ9P2Y5 699 aa18.93■□□□□ 0.62
XRCC3-218ENST00000557439 GGT7Q9UJ14 662 aa18.93■□□□□ 0.62
XRCC3-218ENST00000557439 C5orf60A6NFR6 353 aa18.93■□□□□ 0.62
XRCC3-218ENST00000557439 VWA5AO00534 786 aa18.93■□□□□ 0.62
XRCC3-218ENST00000557439 MNAT1P51948 309 aa18.93■□□□□ 0.62
XRCC3-218ENST00000557439 NLRP11P59045 1033 aaKnown RBP18.93■□□□□ 0.62
XRCC3-218ENST00000557439 RTKN2Q8IZC4 609 aa18.93■□□□□ 0.62
XRCC3-218ENST00000557439 GPD1LQ8N335 351 aa18.93■□□□□ 0.62
XRCC3-218ENST00000557439 ZNF526Q8TF50 670 aaPredicted RBP18.93■□□□□ 0.62
XRCC3-218ENST00000557439 ZKSCAN4Q969J2 545 aaPredicted RBP18.93■□□□□ 0.62
XRCC3-218ENST00000557439 VTI1AQ96AJ9 217 aa18.93■□□□□ 0.62
XRCC3-218ENST00000557439 CCDC114Q96M63 670 aa18.93■□□□□ 0.62
XRCC3-218ENST00000557439 MYPNQ86TC9 1320 aa18.93■□□□□ 0.62
XRCC3-218ENST00000557439 SRRM3A6NNA2 597 aaPredicted RBP18.92■□□□□ 0.62
XRCC3-218ENST00000557439 UNGP13051 313 aaPredicted RBP18.92■□□□□ 0.62
XRCC3-218ENST00000557439 TNNI1P19237 187 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 CALCOCO2Q13137 446 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 ANKRD20A8PQ5CZ79 823 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 SAMD7Q7Z3H4 446 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 CCDC50Q8IVM0 306 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 MCOLN2Q8IZK6 566 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 LPAR1Q92633 364 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 TMEM143Q96AN5 459 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 ZBED3Q96IU2 234 aaPredicted RBP18.92■□□□□ 0.62
XRCC3-218ENST00000557439 FBXL18Q96ME1 805 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 C11orf70Q9BRQ4 267 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 POLR3FQ9H1D9 316 aaPredicted RBP18.92■□□□□ 0.62
XRCC3-218ENST00000557439 INTS9Q9NV88 658 aaKnown RBP18.92■□□□□ 0.62
XRCC3-218ENST00000557439 USTQ9Y2C2 406 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 UMODL1Q5DID0 1318 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 PMM2O15305 246 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 GGPS1O95749 300 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 RARGP13631 454 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 GTF2A1P52655 376 aaPredicted RBP18.92■□□□□ 0.62
XRCC3-218ENST00000557439 MAP3K10Q02779 954 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 KIFAP3Q92845 792 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 HAPLN2Q9GZV7 340 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 CNOT10Q9H9A5 744 aaKnown RBP18.92■□□□□ 0.62
XRCC3-218ENST00000557439 HAUS2Q9NVX0 235 aa18.92■□□□□ 0.62
XRCC3-218ENST00000557439 ZBED4O75132 1171 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 SFNP31947 248 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 GHRHRQ02643 423 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 KYNUQ16719 465 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 SPDYCQ5MJ68 293 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 NBPF12Q5TAG4 269 aaPredicted RBP18.91■□□□□ 0.62
XRCC3-218ENST00000557439 SNRNP48Q6IEG0 339 aaKnown RBP18.91■□□□□ 0.62
XRCC3-218ENST00000557439 SEPT14Q6ZU15 432 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 EXOC3L1Q86VI1 746 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 VSIG10LQ86VR7 867 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 ELAC2Q9BQ52 826 aaKnown RBP18.91■□□□□ 0.62
XRCC3-218ENST00000557439 LRRC19Q9H756 370 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 CD248Q9HCU0 757 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 SLC40A1Q9NP59 571 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 FSCN2O14926 492 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 VIMP08670 466 aaKnown RBP18.91■□□□□ 0.62
XRCC3-218ENST00000557439 HARSP12081 509 aaKnown RBP18.91■□□□□ 0.62
XRCC3-218ENST00000557439 KCNA2P16389 499 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 IBSPP21815 317 aaPredicted RBP18.91■□□□□ 0.62
XRCC3-218ENST00000557439 DSG3P32926 999 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 SSR1P43307 286 aaKnown RBP18.91■□□□□ 0.62
XRCC3-218ENST00000557439 TAS2R40P59535 323 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 PRKCEQ02156 737 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 CLUL1Q15846 466 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 TDRD10Q5VZ19 366 aaKnown RBP18.91■□□□□ 0.62
XRCC3-218ENST00000557439 TMC2Q8TDI7 906 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 C1orf112Q9NSG2 853 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 CD2APQ9Y5K6 639 aa18.91■□□□□ 0.62
XRCC3-218ENST00000557439 HLA-DRAP01903 254 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 RALAP11233 206 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 CD58P19256 250 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 ITGA8P53708 1063 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 ADCY2Q08462 1091 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 FSTL1Q12841 308 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 ATP13A4Q4VNC1 1196 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 C6orf118Q5T5N4 469 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 PLCD3Q8N3E9 789 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 AGBL3Q8NEM8 1001 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 PARP2Q9UGN5 583 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 TBK1Q9UHD2 729 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 ZNF541Q9H0D2 1346 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 TCF4P15884 667 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 MORC4Q8TE76 937 aa18.9■□□□□ 0.62
XRCC3-218ENST00000557439 APOBEC3GQ9HC16 384 aaKnown RBP18.9■□□□□ 0.62
XRCC3-218ENST00000557439 EDN1P05305 212 aa18.89■□□□□ 0.62
XRCC3-218ENST00000557439 IVDP26440 423 aa18.89■□□□□ 0.62
XRCC3-218ENST00000557439 HMGB2P26583 209 aaKnown RBP18.89■□□□□ 0.62
XRCC3-218ENST00000557439 SCTRP47872 440 aa18.89■□□□□ 0.62
XRCC3-218ENST00000557439 TAX1BP1Q86VP1 789 aa18.89■□□□□ 0.62
XRCC3-218ENST00000557439 C12orf50Q8NA57 414 aaPredicted RBP18.89■□□□□ 0.62
XRCC3-218ENST00000557439 MTMR14Q8NCE2 650 aa18.89■□□□□ 0.62
XRCC3-218ENST00000557439 DDX27Q96GQ7 796 aaKnown RBP18.89■□□□□ 0.62
XRCC3-218ENST00000557439 NTPCRQ9BSD7 190 aaKnown RBP18.89■□□□□ 0.62
XRCC3-218ENST00000557439 TIPINQ9BVW5 301 aa18.89■□□□□ 0.62
XRCC3-218ENST00000557439 ANKFY1Q9P2R3 1169 aa18.89■□□□□ 0.62
XRCC3-218ENST00000557439 CNOT7Q9UIV1 285 aaKnown RBP18.89■□□□□ 0.62
XRCC3-218ENST00000557439 PI4K2BG5E9Z4 385 aa18.89■□□□□ 0.61
XRCC3-218ENST00000557439 VNN1O95497 513 aa18.89■□□□□ 0.61
XRCC3-218ENST00000557439 AGTP01019 485 aa18.89■□□□□ 0.61
XRCC3-218ENST00000557439 CCND2P30279 289 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms