RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 NUB1Q9Y5A7 615 aa8.55□□□□□ -1.04
PSEN1-222ENST00000557356 UBE4BO95155 1302 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 NLRC5Q86WI3 1866 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 FAM237AA0A1B0GTK4 181 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 A0A1B0GVL5 298 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 CASTOR2A6NHX0 329 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 SPDYE4A6NLX3 237 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 HIDE1A8MVS5 230 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 H7C4K7 107 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 RBAK-RBAKDNI3L0D1 243 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 PER2O15055 1255 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 LILRB3O75022 631 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 CLASP2O75122 1294 aaKnown RBP8.54□□□□□ -1.04
PSEN1-222ENST00000557356 CSPG5O95196 566 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 EDN1P05305 212 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 PFKFB1P16118 471 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 AFMP43652 599 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 KCNC3Q14003 757 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 PTPN14Q15678 1187 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 UPP1Q16831 310 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 FAM171A1Q5VUB5 890 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 ANKRD54Q6NXT1 300 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-222ENST00000557356 ANKS3Q6ZW76 656 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 ADGRD2Q7Z7M1 963 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 TMEM173Q86WV6 379 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-222ENST00000557356 RNF168Q8IYW5 571 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-222ENST00000557356 CEP120Q8N960 986 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 APPL2Q8NEU8 664 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-222ENST00000557356 ZNF507Q8TCN5 953 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 ADAMTS19Q8TE59 1207 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 STAMQ92783 540 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 KIF12Q96FN5 646 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 PAGE5Q96GU1 130 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 RIPOR3Q96MK2 946 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 NECTIN4Q96NY8 510 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 KLHL5Q96PQ7 755 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 PLEKHA4Q9H4M7 779 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 RXFP1Q9HBX9 757 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 EXOC1Q9NV70 894 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 TBC1D7Q9P0N9 293 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 SERTAD1Q9UHV2 236 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 CPSF3Q9UKF6 684 aaKnown RBP8.54□□□□□ -1.04
PSEN1-222ENST00000557356 HPSEQ9Y251 543 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 R3HCC1Q9Y3T6 440 aaKnown RBP8.54□□□□□ -1.04
PSEN1-222ENST00000557356 C2CD2Q9Y426 696 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 HCFC2Q9Y5Z7 792 aa8.54□□□□□ -1.04
PSEN1-222ENST00000557356 RANBP2P49792 3224 aaKnown RBP8.54□□□□□ -1.04
PSEN1-222ENST00000557356 PRRC2BQ5JSZ5 2229 aaKnown RBP8.54□□□□□ -1.04
PSEN1-222ENST00000557356 ZNF233A6NK53 670 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 ANKRD63C9JTQ0 380 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 H3BQ06 376 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-222ENST00000557356 PODXLO00592 558 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 SYN3O14994 580 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 EXTL3O43909 919 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 ZNF202O95125 648 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 EFEMP2O95967 443 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 CNPP09543 421 aaKnown RBP8.53□□□□□ -1.04
PSEN1-222ENST00000557356 CXCL8P10145 99 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 LRPAP1P30533 357 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 LTBRP36941 435 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 MTHFRP42898 656 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 CLCNKBP51801 687 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 NAB2Q15742 525 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 SMAD2Q15796 467 aaKnown RBP8.53□□□□□ -1.04
PSEN1-222ENST00000557356 ZBTB6Q15916 424 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 GLRA4Q5JXX5 417 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 ATAT1Q5SQI0 421 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 ARMCX5Q6P1M9 558 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 CEP57Q86XR8 500 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 FSIP1Q8NA03 581 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 SMRP1Q8NCR6 262 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 BCL7CQ8WUZ0 217 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-222ENST00000557356 RIN2Q8WYP3 895 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-222ENST00000557356 PIK3R5Q8WYR1 880 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 FAM212AQ96EL1 285 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 MSLNLQ96KJ4 702 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 UHRF1Q96T88 793 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-222ENST00000557356 GPR62Q9BZJ7 368 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 ADAM7Q9H2U9 754 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 TSHZ2Q9NRE2 1034 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 RMND1Q9NWS8 449 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 MARCH5Q9NX47 278 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 CHMP5Q9NZZ3 219 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 MAFFQ9ULX9 164 aa8.53□□□□□ -1.04
PSEN1-222ENST00000557356 LACTBL1A8MY62 500 aa8.52□□□□□ -1.05
PSEN1-222ENST00000557356 C2CD2LO14523 706 aa8.52□□□□□ -1.05
PSEN1-222ENST00000557356 TEX28O15482 410 aa8.52□□□□□ -1.05
PSEN1-222ENST00000557356 LINC01565O15544 149 aa8.52□□□□□ -1.05
PSEN1-222ENST00000557356 MBTPS2O43462 519 aa8.52□□□□□ -1.05
PSEN1-222ENST00000557356 ACTN4O43707 911 aaKnown RBP8.52□□□□□ -1.05
PSEN1-222ENST00000557356 B4GALT3O60512 393 aa8.52□□□□□ -1.05
PSEN1-222ENST00000557356 PRPF40AO75400 957 aaKnown RBP8.52□□□□□ -1.05
PSEN1-222ENST00000557356 PRPF6O94906 941 aaKnown RBP8.52□□□□□ -1.05
PSEN1-222ENST00000557356 KIF4AO95239 1232 aa8.52□□□□□ -1.05
PSEN1-222ENST00000557356 SMC2O95347 1197 aa8.52□□□□□ -1.05
PSEN1-222ENST00000557356 GLUD1P00367 558 aa8.52□□□□□ -1.05
PSEN1-222ENST00000557356 MYBP10242 640 aa8.52□□□□□ -1.05
PSEN1-222ENST00000557356 FGFR3P22607 806 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms