RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 SNX27Q96L92 541 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 TBC1D32Q96NH3 1257 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 TCHPQ9BT92 498 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 IRF2BPLQ9H1B7 796 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 SLC38A7Q9NVC3 462 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.53■□□□□ 0.08
SNX6-210ENST00000557341 MTRRQ9UBK8 725 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 KCNG1Q9UIX4 513 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 SFI1A8K8P3 1242 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 C8AP07357 584 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 HARSP12081 509 aaKnown RBP15.52■□□□□ 0.08
SNX6-210ENST00000557341 PLS3P13797 630 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 HOXA9P31269 272 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 SMTNP53814 917 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 SLC12A3P55017 1021 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 NOLC1Q14978 699 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNX6-210ENST00000557341 XKR4Q5GH76 650 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 PPM1LQ5SGD2 360 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 ASTLQ6HA08 431 aaPredicted RBP15.52■□□□□ 0.08
SNX6-210ENST00000557341 DCLRE1AQ6PJP8 1040 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 TMEM105Q8N8V8 129 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 C3orf58Q8NDZ4 430 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 SPIRE2Q8WWL2 714 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 NXPE3Q969Y0 559 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 AK8Q96MA6 479 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 ACAP3Q96P50 834 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 MYADMQ96S97 322 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 PLIN2Q99541 437 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 NTPCRQ9BSD7 190 aaKnown RBP15.52■□□□□ 0.08
SNX6-210ENST00000557341 ANKFY1Q9P2R3 1169 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 FBXL21Q9UKT6 434 aa15.52■□□□□ 0.08
SNX6-210ENST00000557341 ABLIM1O14639 778 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 SLC26A4O43511 780 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 TOM1L1O75674 476 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 PLA2G4BP0C869 781 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 MAPTP10636 758 aaKnown RBP15.51■□□□□ 0.07
SNX6-210ENST00000557341 TKTP29401 623 aaKnown RBP15.51■□□□□ 0.07
SNX6-210ENST00000557341 SOX4Q06945 474 aaPredicted RBP15.51■□□□□ 0.07
SNX6-210ENST00000557341 TMEM119Q4V9L6 283 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 LARP1BQ659C4 914 aaKnown RBP15.51■□□□□ 0.07
SNX6-210ENST00000557341 ALKAL1Q6UXT8 129 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 ZPBP2Q6X784 338 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 ANKS3Q6ZW76 656 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 TMEM161BQ8NDZ6 487 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 SLC7A14Q8TBB6 771 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 DDX27Q96GQ7 796 aaKnown RBP15.51■□□□□ 0.07
SNX6-210ENST00000557341 PHOX2BQ99453 314 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 CNTN3Q9P232 1028 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 LARSQ9P2J5 1176 aaKnown RBP15.51■□□□□ 0.07
SNX6-210ENST00000557341 PATJQ8NI35 1801 aa15.51■□□□□ 0.07
SNX6-210ENST00000557341 H0YCG3 227 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 PODXLO00592 558 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 ADAM12O43184 909 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 GALR2O43603 387 aaPredicted RBP15.5■□□□□ 0.07
SNX6-210ENST00000557341 XYLBO75191 536 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 BMP15O95972 392 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 LAMP2P13473 410 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 KCNE1P15382 129 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 FSHRP23945 695 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 OR1D2P34982 312 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 BRCC3P46736 316 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 CLCN5P51795 746 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 RAB33AQ14088 237 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 AXDND1Q5T1B0 1012 aaPredicted RBP15.5■□□□□ 0.07
SNX6-210ENST00000557341 CWF19L1Q69YN2 538 aaKnown RBP15.5■□□□□ 0.07
SNX6-210ENST00000557341 BRAPQ7Z569 592 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 GRASPQ7Z6J2 395 aaPredicted RBP15.5■□□□□ 0.07
SNX6-210ENST00000557341 FLCNQ8NFG4 579 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 RSAD2Q8WXG1 361 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 CALML4Q96GE6 196 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 ZMAT2Q96NC0 199 aaKnown RBP15.5■□□□□ 0.07
SNX6-210ENST00000557341 ODF2LQ9ULJ1 636 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 BACE2Q9Y5Z0 518 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 CDY1Q9Y6F8 540 aa15.5■□□□□ 0.07
SNX6-210ENST00000557341 ZFP37Q9Y6Q3 630 aaPredicted RBP15.5■□□□□ 0.07
SNX6-210ENST00000557341 I3L4J1 428 aa15.49■□□□□ 0.07
SNX6-210ENST00000557341 NARSO43776 548 aaKnown RBP15.49■□□□□ 0.07
SNX6-210ENST00000557341 POU2F2P09086 479 aa15.49■□□□□ 0.07
SNX6-210ENST00000557341 SRFP11831 508 aa15.49■□□□□ 0.07
SNX6-210ENST00000557341 IGFBP6P24592 240 aaPredicted RBP15.49■□□□□ 0.07
SNX6-210ENST00000557341 UBA7P41226 1012 aa15.49■□□□□ 0.07
SNX6-210ENST00000557341 NCKAP1LP55160 1127 aa15.49■□□□□ 0.07
SNX6-210ENST00000557341 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
SNX6-210ENST00000557341 CD300LGQ6UXG3 332 aa15.49■□□□□ 0.07
SNX6-210ENST00000557341 SIX5Q8N196 739 aa15.49■□□□□ 0.07
SNX6-210ENST00000557341 BICD1Q96G01 975 aa15.49■□□□□ 0.07
SNX6-210ENST00000557341 ZBTB45Q96K62 511 aaPredicted RBP15.49■□□□□ 0.07
SNX6-210ENST00000557341 FAM86C1Q9NVL1 165 aa15.49■□□□□ 0.07
SNX6-210ENST00000557341 POLIQ9UNA4 740 aa15.49■□□□□ 0.07
SNX6-210ENST00000557341 NUB1Q9Y5A7 615 aa15.49■□□□□ 0.07
SNX6-210ENST00000557341 FANCMQ8IYD8 2048 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 DMDP11532 3685 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 H0Y858 1186 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 CCL16O15467 120 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 CLDN3O15551 220 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 CFHP08603 1231 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 AOC1P19801 751 aa15.48■□□□□ 0.07
SNX6-210ENST00000557341 RPL9P32969 192 aaKnown RBP15.48■□□□□ 0.07
SNX6-210ENST00000557341 MATR3P43243 847 aaKnown RBP eCLIP15.48■□□□□ 0.07
SNX6-210ENST00000557341 MCL1Q07820 350 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms