RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 HERC2P3Q9BVR0 1158 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 NFKBIZQ9BYH8 718 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 GBP3Q9H0R5 595 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 SEMA4AQ9H3S1 761 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 PLEKHA4Q9H4M7 779 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 ZSWIM4Q9H7M6 989 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 KCNK12Q9HB15 430 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 WDR6Q9NNW5 1121 aaKnown RBP9.65□□□□□ -0.86
VRK1-206ENST00000557222 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.65□□□□□ -0.86
VRK1-206ENST00000557222 CUEDC1Q9NWM3 386 aaPredicted RBP9.65□□□□□ -0.86
VRK1-206ENST00000557222 EPS15L1Q9UBC2 864 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 WNT16Q9UBV4 365 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 PLXNA3P51805 1871 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 DENND4AQ7Z401 1863 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 CCDC194A0A1B0GVG4 234 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 PRR23AA6NEV1 266 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 SLC37A4O43826 429 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 LYPLA2O95372 231 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 BAG4O95429 457 aaKnown RBP9.64□□□□□ -0.87
VRK1-206ENST00000557222 IL2RAP01589 272 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 SRGAP2CP0DJJ0 459 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 ITGA4P13612 1032 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 YWHABP31946 246 aaKnown RBP9.64□□□□□ -0.87
VRK1-206ENST00000557222 NPEPPSP55786 919 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 PTENP60484 403 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 DSG1Q02413 1049 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 CREMQ03060 361 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 DSC1Q08554 894 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 TFDP1Q14186 410 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 LONRF3Q496Y0 759 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 RNFT1Q5M7Z0 435 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 KIAA0319Q5VV43 1072 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 PLA2G4FQ68DD2 849 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 KANK3Q6NY19 840 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 NOTUMQ6P988 496 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 CCDC105Q8IYK2 499 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 COLGALT2Q8IYK4 626 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 HACE1Q8IYU2 909 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 RNF149Q8NC42 400 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 SMG8Q8ND04 991 aaKnown RBP9.64□□□□□ -0.87
VRK1-206ENST00000557222 NKD2Q969F2 451 aaPredicted RBP9.64□□□□□ -0.87
VRK1-206ENST00000557222 TMEM143Q96AN5 459 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 SH2D3AQ9BRG2 576 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 SLKQ9H2G2 1235 aaPredicted RBP9.64□□□□□ -0.87
VRK1-206ENST00000557222 MINDY3Q9H8M7 445 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 CHST7Q9NS84 486 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.64□□□□□ -0.87
VRK1-206ENST00000557222 GIT1Q9Y2X7 761 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 FRYLO94915 3013 aa9.64□□□□□ -0.87
VRK1-206ENST00000557222 STK36Q9NRP7 1315 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 CCDC195A0A1B0GUA6 201 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 ARL5CA6NH57 179 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 TEX28O15482 410 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 B4GALT3O60512 393 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 ERLIN2O94905 339 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 GLUD1P00367 558 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 XRCC6P12956 609 aaKnown RBP eCLIP9.63□□□□□ -0.87
VRK1-206ENST00000557222 NPR3P17342 541 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 SOX11P35716 441 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 GLUD2P49448 558 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 EMC2Q15006 297 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 OXLD1Q5BKU9 147 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 CWF19L1Q69YN2 538 aaKnown RBP9.63□□□□□ -0.87
VRK1-206ENST00000557222 ASCL5Q7RTU5 278 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 HAS1Q92839 578 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 POM121Q96HA1 1249 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 LXNQ9BS40 222 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 COLEC11Q9BWP8 271 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 CSRNP2Q9H175 543 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 SMOC2Q9H3U7 446 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 MAN1C1Q9NR34 630 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 ANKEF1Q9NU02 776 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 MARCH5Q9NX47 278 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 ZDHHC7Q9NXF8 308 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 FNIP2Q9P278 1114 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 WRAP73Q9P2S5 460 aaPredicted RBP9.63□□□□□ -0.87
VRK1-206ENST00000557222 FBXL21Q9UKT6 434 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 IPPQ9Y573 584 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 HRH3Q9Y5N1 445 aa9.63□□□□□ -0.87
VRK1-206ENST00000557222 ZFP37Q9Y6Q3 630 aaPredicted RBP9.63□□□□□ -0.87
VRK1-206ENST00000557222 MARCH6O60337 910 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 CCNT1O60563 726 aaKnown RBP9.62□□□□□ -0.87
VRK1-206ENST00000557222 TSPAN1O60635 241 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 SLITRK3O94933 977 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 POMCP01189 267 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 OR1G1P47890 313 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 AFF1P51825 1210 aaKnown RBP9.62□□□□□ -0.87
VRK1-206ENST00000557222 AK2P54819 239 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 CENPCQ03188 943 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 SPIRE1Q08AE8 756 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 USP41Q3LFD5 358 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 XKR9Q5GH70 373 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 PHLDB3Q6NSJ2 640 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 ERMP1Q7Z2K6 904 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 SKAP1Q86WV1 359 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 DTWD2Q8NBA8 298 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 FLCNQ8NFG4 579 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 WASF1Q92558 559 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 BORCS6Q96GS4 357 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 HSD17B14Q9BPX1 270 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms