RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 MTMR4Q9NYA4 1195 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 HDAC6Q9UBN7 1215 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 TLR6Q9Y2C9 796 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 CORINQ9Y5Q5 1042 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 SCN5AQ14524 2016 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 TRIP12Q14669 1992 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-223ENST00000557076 SCN10AQ9Y5Y9 1956 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 CDK5RAP2Q96SN8 1893 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 MCM3APO60318 1980 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 MYH1P12882 1939 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 MYOCOSA0A1B0GUC4 107 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-223ENST00000557076 UPK3BL1B0FP48 263 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 UPK3BL2E5RIL1 263 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 HAS3O00219 553 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 PPFIA4O75335 1185 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 CILPO75339 1184 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 MMP1P03956 469 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 HOXA5P20719 270 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 SDHBP21912 280 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 CTNNB1P35222 781 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 BUD31P41223 144 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-223ENST00000557076 CHMP4BP1P59074 171 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 SLFN5Q08AF3 891 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 DGKDQ16760 1214 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 SBK1Q52WX2 424 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 ZNF385BQ569K4 471 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 SLFN13Q68D06 897 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 RCSD1Q6JBY9 416 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 GIMAP6Q6P9H5 292 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 NSMFQ6X4W1 530 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 TMEM184AQ6ZMB5 413 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 SERINC5Q86VE9 423 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 KIAA2013Q8IYS2 634 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 ZNF444Q8N0Y2 327 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-223ENST00000557076 KREMEN2Q8NCW0 462 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 DNERQ8NFT8 737 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 SPPL3Q8TCT6 385 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 ATP8B4Q8TF62 1192 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 APBB2Q92870 758 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 COPS5Q92905 334 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 CCDC74BQ96LY2 380 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 KATNAL1Q9BW62 490 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 IFIH1Q9BYX4 1025 aaKnown RBP5.55□□□□□ -1.52
SCFD1-223ENST00000557076 MAF1Q9H063 256 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 S1PR5Q9H228 398 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 ARMT1Q9H993 441 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 ZNF287Q9HBT7 754 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 PARD6AQ9NPB6 346 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 GPR160Q9UJ42 338 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 CNOT6Q9ULM6 557 aaKnown RBP5.55□□□□□ -1.52
SCFD1-223ENST00000557076 COL4A6Q14031 1691 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 MAP1BP46821 2468 aaKnown RBP5.55□□□□□ -1.52
SCFD1-223ENST00000557076 FAM208BQ5VWN6 2430 aa5.55□□□□□ -1.52
SCFD1-223ENST00000557076 PLXNA3P51805 1871 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 FOCADQ5VW36 1801 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 FSD2A1L4K1 749 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 CAND2O75155 1236 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 GH1P01241 217 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 ICAM1P05362 532 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 MCCP23508 829 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 ADD2P35612 726 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 THPOP40225 353 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 SLC1A4P43007 532 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 ZNF200P98182 395 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-223ENST00000557076 TEKQ02763 1124 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 LMNB2Q03252 620 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 UBE3CQ15386 1083 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 ST3GAL2Q16842 350 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 CLEC16AQ2KHT3 1053 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 TCERG1LQ5VWI1 586 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 TMEM151BQ8IW70 566 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 TRMT2AQ8IZ69 625 aaKnown RBP5.54□□□□□ -1.52
SCFD1-223ENST00000557076 RGS22Q8NE09 1264 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 KCNG4Q8TDN1 519 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 GATAD2BQ8WXI9 593 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 ZNF689Q96CS4 500 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-223ENST00000557076 CEP95Q96GE4 821 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 KREMEN1Q96MU8 473 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 CDCA3Q99618 268 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-223ENST00000557076 HAUS7Q99871 368 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 KRTAP4-5Q9BYR2 181 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 TLE6Q9H808 572 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 MRS2Q9HD23 443 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 PNMA2Q9UL42 364 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 CCPG1Q9ULG6 757 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 SORCS3Q9UPU3 1222 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 SLC4A4Q9Y6R1 1079 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 MYO10Q9HD67 2058 aa5.54□□□□□ -1.52
SCFD1-223ENST00000557076 ZBED9Q6R2W3 1325 aa5.53□□□□□ -1.52
SCFD1-223ENST00000557076 FAM221AA4D161 298 aa5.53□□□□□ -1.52
SCFD1-223ENST00000557076 ENPP3O14638 875 aa5.53□□□□□ -1.52
SCFD1-223ENST00000557076 IPO8O15397 1037 aaKnown RBP5.53□□□□□ -1.52
SCFD1-223ENST00000557076 LRRN2O75325 713 aa5.53□□□□□ -1.52
SCFD1-223ENST00000557076 BCAR3O75815 825 aa5.53□□□□□ -1.52
SCFD1-223ENST00000557076 MBD4O95243 580 aa5.53□□□□□ -1.52
SCFD1-223ENST00000557076 ARIH2O95376 493 aa5.53□□□□□ -1.52
SCFD1-223ENST00000557076 GLP2RO95838 553 aa5.53□□□□□ -1.52
SCFD1-223ENST00000557076 F2P00734 622 aa5.53□□□□□ -1.52
SCFD1-223ENST00000557076 ITGB1P05556 798 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms